Fomitiporia mediterranea: FOMMEDRAFT_93341
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Entry
FOMMEDRAFT_93341 CDS
T03132
Name
(RefSeq) WD40 repeat-like protein
Organism
fme
Fomitiporia mediterranea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
PD40
eIF2A
NACHT
PROPPIN
AAA_16
Cytochrom_D1
ATPase_2
NB-ARC
Parvo_NS1
AAA
KAP_NTPase
RNA_helicase
AAA_22
AAA_5
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
18680700
NCBI-ProteinID:
XP_007269939
JGI:
Fomme1_93341
LinkDB
All DBs
Position
Unknown
AA seq
1229 aa
AA seq
DB search
MNAFNRNTCLEDTRVEVLNEIMDWLLSDTTQNILWLHGVAGCGKSAIATTIAEYCREMSR
LGAFVFFRRADGTEDQLISLFRTIAFQLVMFDSSIVKYVKAVVKKSDHVTEAVAEVQFKK
LLLDPLTAARDEMQGPVVIILDALDECGTPEARRTLMTLLRREFGRLPPNFRFLITSRPE
ADINVALSPNVNSSVYELALDSRSDNSRQDVLRYIDHEISVIFEDLGLDIPDEWGTYMDQ
LAEASEGLFIWASTAINLIKGNPSPFDELESIVGKSHLLRGLDRLYGSILRSSGVVSECY
PASITHFCQIFGLILLSNAPLSDTAIDSILGLSPRNSARLILSKLRSVIAFTPGEPVHLL
HTSFADYLLSKPCPKPCLAHKGPSDCLSGRWFIDESSQQSDIAMRCFIVMEEALHFNMCD
LESSFIYNKDVTGIEDRINKKLTPHLQYACKYWAQHVVNAPYSRELLDELTKFARKRLLY
WFEAIGLLGLVRSIASRALLDAAAWSEEHDSDISSFLRDASRLASTFTIPMTESVPHIYV
SMLPLMKDDSEVAAHYLKQTSRMVEVDRIGTKRPPLWLKVLEGHLGTVQSVSFSPDGECV
ASGSDDRTARIWNVESGEVLCEFSEGNGAEVNSVVFSPDGRRIAFGTCRGTISIWDIESK
ELVSGPFKGHTGSVRGVAFSPDGMHITSGSADTTIRVWDIEKASTLRVLEGHTASVWSVA
FSSDGNCIVSGSEDKTLRVWDPETGQAIGKPFVGHTDGVQCVAISPDCKCIVSGSNDFTV
RVWGMESEKVVAGPFWHLTFVKSVAFSSDGRRVVSASDDFSIVVWDMESGDIASGPFTGH
TDTVISVAFSPDGSRIVSGSRDKTVRLWDAHIGKMVSDTSTGHTAAVMAVAFSPDGSRIV
SGANDKTVRIWDANTAEAASAPFEGHTDHVNSVAFRRDGKQIVSGSEDKSVIVWDVESGK
MVFKPFKEHVDIVNLVAFSPDGTRIVSGSRDRTIIIWNAENGNMIAQSERVHGSAIGAAI
FSPDGAIIASVSVNNDVVIWNTENGKCSGEIVPGPWKGHNDTVTSIAFSPDGVYLVSGSE
DRKIIVWNASNGNIVSGPYEGHSNGITCVALSPDGSRIVSCSWDTTIRIWNVPGKEDISS
MTGNSASDAAAPCSSMQDVNGRFASWTLSDNGWVLSAQDELLLWLPPDIRPTLWRPQDAA
VFSCEFSTKLNFRNVAYGKSWRECFNRYV
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatttaatcgcaatacatgccttgaggatacacgggtcgaggtcctgaatgag
ataatggactggctcctatcggacactacgcaaaatatcttgtggcttcacggtgtagcg
ggatgtggcaaaagcgcgattgccacgactatcgcggaatactgccgagaaatgtcacgg
cttggggcttttgttttctttaggagagcggacggcacagaagaccagcttatttcgcta
ttccgaacaattgcattccagctagtgatgtttgattcgtctatagtgaaatacgtcaag
gctgtggtcaagaagagtgaccatgtcactgaggccgtcgccgaggtccaattcaagaag
cttcttttggacccacttactgcagcgcgggacgaaatgcaaggccctgtcgtgattatc
ctcgatgcattggatgaatgtggtacacctgaggctcgaaggacattgatgacacttctt
agacgggagtttggaaggctgcctcctaatttccgattcctcattacaagccgaccagag
gctgatatcaatgtggcattgtcgccaaatgtaaatagttctgtatatgaacttgcctta
gattcgcgctcggataatagccgacaagatgttctgcgctatattgatcacgagatcagc
gtcatcttcgaggatttagggctcgatataccggatgaatggggcacatatatggatcag
cttgcagaggcttcagagggcctgttcatttgggcgtcaacagcgattaatctgattaag
ggcaaccccagcccatttgacgaactcgagagtattgttgggaagtcgcatctacttcgc
ggtctcgaccggttgtatggatcgatccttaggagctctggagtcgtttcagagtgctac
cccgcatctattactcacttctgtcaaatatttggtctcatcctattgagcaatgcacca
ctttcggacactgcgattgattcaatcctagggttatcgcccagaaactcagcacgatta
attctttccaaattgcggagcgttatcgctttcacccctggagagcctgtgcatcttctc
catacatcatttgccgactatctcttatcaaagccttgcccaaagccatgcttggcacac
aagggacccagtgactgtctgtccggccgctggttcattgacgagtcttcccaacagtcg
gacattgctatgcgatgcttcattgttatggaggaagcgcttcattttaatatgtgtgat
ctggaatcgtctttcatatacaacaaggatgtcactggcatcgaggatcgtataaacaag
aagctaacgccgcatctacaatatgcgtgcaagtactgggcacaacacgtcgtcaatgca
ccgtactcacgcgagctgttggatgagttaacgaaatttgcacgtaagcggctgctgtac
tggtttgaggcgattggactactaggcctggtacgtagtatcgcgagtcgggcgctcctg
gacgccgctgcgtggtccgaagagcatgattcagacatttcttcgttcttaagggatgct
agcagactcgcctctacattcaccattccgatgactgaaagcgtcccgcatatctacgtc
tccatgctcccgctcatgaaggacgattcagaagtggcagcgcactacttgaaacagaca
tctcggatggtggaggtggatcgcatagggacgaagaggccgccgctctggttaaaggta
ctggagggccacttgggtactgttcagtctgtctcattctcgcccgatggtgagtgtgtt
gcttcgggctctgatgaccggacagccagaatctggaacgttgagagtggtgaggtgcta
tgcgaattttctgaggggaacggagcggaggtcaattctgtcgtattctcgccagacggc
cgccgtatcgcctttgggacatgtcgtgggacaatctcgatctgggacattgagtcgaag
gagctagtgtcggggccatttaaaggacatactggcagtgtgcggggcgttgcattttct
cctgatggaatgcacattacctcaggctcggcggacacaacaataagagtatgggacatc
gagaaggcatctactcttcgtgttcttgaggggcatacagctagcgtctggtctgtcgct
ttctcttctgacgggaactgcatcgtttcgggctccgaggacaagacacttcgagtctgg
gacccagagacgggacaggccattggcaagccctttgtaggacacactgacggagttcaa
tgcgtggcaatttcacccgattgcaaatgcattgtctccggctcaaatgatttcacggtg
agagtctggggaatggagagcgagaaagtcgtcgccggcccattttggcatttaactttt
gtcaaatctgtcgcattttcgtctgacggaaggcgtgtagtgtcggcgtccgacgatttc
tcaattgttgtatgggatatggaaagtggtgacattgcttctggcccttttactggtcac
acagatactgtaatctctgttgccttctcccctgacgggtcacgcatcgtctcaggatca
cgggacaagactgtcagactctgggacgcacatataggcaaaatggtttccgacacatct
accgggcacacagcagcagtcatggccgttgcgttttctccagatggcagccggatagtg
tcgggtgctaatgataaaacagtaagaatctgggatgctaatacggcagaagctgcttct
gctccgtttgagggacatactgatcatgtcaattctgtggctttccggcgtgatggaaaa
cagattgtctctggttctgaagataagtctgttattgtctgggacgtagaaagtggtaag
atggtgttcaagccattcaaagagcacgtggatattgtcaacttggttgccttctctcct
gacggcacacgcatcgtctctggctctagagacagaaccatcattatctggaatgctgaa
aatggaaacatgattgctcaatcggaacgagtgcacgggtccgcgattggggctgctatc
ttctcaccagatggtgcgattattgcatcggtgtctgtcaacaatgatgttgtcatctgg
aacaccgaaaacgggaaatgtagcggtgagatcgtccctggaccttggaaaggacacaac
gacacagtcacgtctattgcgttttcacctgacggagtatatctcgtttccggatcggaa
gatcggaagattattgtctggaatgccagcaatggaaatatcgtttctgggccatatgaa
ggacattctaatggcattacttgcgttgccttgtcgccagatggttcgcgtattgtgtcc
tgctcttgggacacaacgattcgcatttggaatgtaccaggcaaggaagacatttcctca
atgaccggaaactcagcaagcgatgcggctgccccatgttcatccatgcaagacgtcaac
ggacggtttgcaagttggaccctttcagacaatggatgggtattaagtgcacaagacgag
ttgcttttatggcttccgcccgacattcgcccgacactctggcggccacaggacgcagca
gttttcagttgcgagttttccacaaagctcaatttcaggaatgttgcatatggcaaaagt
tggcgggaatgtttcaaccggtatgtatga
DBGET
integrated database retrieval system
