KEGG   Flavobacterium magnum: HYN48_07060
Entry
HYN48_07060       CDS       T06478                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fmg  Flavobacterium magnum
Pathway
fmg02024  Quorum sensing
fmg03060  Protein export
fmg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fmg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HYN48_07060
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HYN48_07060
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HYN48_07060
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fmg02044]
    HYN48_07060
Enzymes [BR:fmg01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HYN48_07060
Secretion system [BR:fmg02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HYN48_07060
  Eukaryotic Sec-SRP protein
   HYN48_07060
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin nSTAND3 AAA_33 AAA_22 AAA_24 cobW CbiA CLP1_P APS_kinase AAA_31 AAA_18 AAA_17 AAA_26 KAP_NTPase ATPase ArsA_ATPase AAA_16 ResIII TsaE NACHT 6PF2K KTI12 NB-ARC MMR_HSR1 DO-GTPase1 ATP_bind_1 AAA_14 ATPase_2 Transketolase_C
Other DBs
NCBI-ProteinID: AWA29856
UniProt: A0A2S0RDV7
LinkDB
Position
1725191..1726528
AA seq 445 aa
MFDNLSEKLDKAFHILKGHGKITEINVADTLKEVRRALLDADVNFKIAKEFTNTVKEKAI
GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGINLSGNPTVILMSGLQGSGKTTFSGKLA
NHLKTKRNKKPLLVACDVYRPAAINQLHVVGDQIGVEVYSELGNNNPVEIALNAVKYAKE
KGYNVVIVDTAGRLAVDEEMMTEIANVHKALNPQETLFVVDSMTGQDAVNTAKAFNDRLN
FDGVILTKLDGDTRGGAALTIKSVVNKPIKFVGTGEKMEAIDVFYPNRMAERILGMGDVV
SLVERAQEQFNEEEARKLQKKIAKNEFGFDDFLSQIQQVKKMGNMKDLVGMIPGASKAMK
DVEIEDDAFKHIEAIIYSMTPAERSRPAIIDMKRKTRIAKGAGRRIEEVNQLMKQFDQMS
KMMKMMQGPGGKNLMKMMGGMKGMR
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgttcgataatttaagcgaaaaactcgataaggcgtttcatatcctgaaaggccacggc
aaaatcaccgaaatcaatgtcgccgatacccttaaggaagtgcgccgcgcgctcctggat
gccgacgtcaattttaaaatagccaaggaatttaccaatacggtaaaggaaaaagcaatc
gggcaggatgtattgaccacgctgcagccgggccagcttttggtcaagctcgtaaaggat
gagctgaccgaattgatgggtggcgatgtggcaggcatcaatctttcaggaaatccgacg
gttatcctgatgtcaggactccaagggtcgggtaaaacgactttttcaggaaaactggcc
aaccaccttaagacgaagagaaataagaagccgctcctggtagcctgtgatgtgtaccgt
cccgcggcgatcaaccagctgcacgtagttggcgaccagataggcgttgaagtgtattcg
gagctgggaaataacaaccccgttgagattgctttgaatgccgttaaatatgcgaaggaa
aaaggctacaacgtagtcatcgtcgatacagcaggtcgtcttgcggtagatgaagaaatg
atgactgaaatcgcgaatgtccataaggcgttgaatccgcaggaaacgcttttcgtcgtc
gattcgatgacaggacaggatgccgtcaatacggccaaggcgtttaacgaccgactcaat
tttgacggtgtcatcctgacaaaactcgatggtgacaccagagggggtgccgccctgacc
attaaatcggtggtgaacaagccgatcaagtttgtcggtaccggggaaaaaatggaagcg
attgacgtattctatccaaatcgtatggccgagcgtatccttgggatgggtgatgtcgta
tcgctggtagaaagggcgcaggagcagtttaatgaagaggaggcccggaaattacagaag
aagattgcgaagaatgaattcggattcgacgatttcctcagccagatccaacaggtcaag
aaaatgggtaacatgaaagaccttgtcgggatgattccaggcgcgtcaaaagccatgaaa
gatgtcgagattgaagacgatgcgttcaagcacattgaagcgatcatttattcaatgaca
ccggcagaacgctctcgcccggcaatcatcgacatgaaaaggaaaacccggattgccaaa
ggtgccggacgcaggattgaggaggtcaaccaactcatgaagcaattcgaccagatgagc
aaaatgatgaagatgatgcaggggcccggaggaaaaaacctcatgaaaatgatgggcggc
atgaaaggaatgagataa

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