KEGG   Fuerstia marisgermanicae: Fuma_01889Help
Entry
Fuma_01889        CDS       T04678                                 

Definition
(GenBank) Putative DNA ligase-like protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
fmr  Fuerstia marisgermanicae
Pathway
fmr03030  DNA replication
fmr03410  Base excision repair
fmr03420  Nucleotide excision repair
fmr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fmr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Fuma_01889
   03410 Base excision repair
    Fuma_01889
   03420 Nucleotide excision repair
    Fuma_01889
   03430 Mismatch repair
    Fuma_01889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fmr03032]
    Fuma_01889
   03400 DNA repair and recombination proteins [BR:fmr03400]
    Fuma_01889
Enzymes [BR:fmr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Fuma_01889
    6.5.1.6  DNA ligase (ATP or NAD+)
     Fuma_01889
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Fuma_01889
DNA replication proteins [BR:fmr03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Fuma_01889
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Fuma_01889
DNA repair and recombination proteins [BR:fmr03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Fuma_01889
   NER (nucleotide excision repair)
    Other NER factors
     Fuma_01889
   MMR (mismatch exicision repair)
    Other MMR factors
     Fuma_01889
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Nitr_red_assoc
Motif
Other DBs
NCBI-ProteinID: APZ92279
UniProt: A0A1P8WE15
LinkDB All DBs
Position
2501711..2503306
Genome map
AA seq 531 aa AA seqDB search
MKRFSQLYTSLDATTKTTGKTAVLVDYFSEADPADAAWAIYFLSGKKLQRLVPMKLLRTW
SAEVAGIEDWMFDECYEVVGDLAEVMALILPAPQSQSDVPLHEWVTQRLLPLKKLCEPEQ
RSAMVEYWQQLDQTERFVLHKLMTGAFRVGVSQKMVVKALAQRFGLPSEVLAHRLMGDWE
PSAEFFNSLMNADTGDAHISQPYPFFLAHPLEAYVETLGPVTDWQAEWKWDGIRAQLLKR
DDQFFIWSRGEELMTDRFPELTAIADSVPNGSAVDGEIVAFKDGGILPFSQMQRRIGRKK
PGKKILSDIPVSFIAFDLLEWQGRDVREEPLTFRRQQLQGIVDAVATENPNTAIQLSKEL
PCQSWSDLAELRQQSRENQAEGLMLKRRDSPYRVGRPRGDWWKWKIEPYTVDAVLTYAQR
GSGRRASLYSDYTFGIWNDGELVTFAKAYSGLTDEEIAEVDRFVRANTLERFGPVRSVTP
KLVFELAFENIQVSKRHKSGIAVRFPRIIRWRHDLKIEAADSLEYVKAMIE
NT seq 1596 nt NT seq  +upstreamnt  +downstreamnt
atgaagcgttttagccaactgtatacaagtctggacgcaaccacgaagacaaccggaaaa
acggcagtcctggtggactacttctctgaagctgatccggcggatgcggcctgggccatc
tatttcctgagcgggaaaaaacttcagcggctggtcccgatgaagttgcttcgaacgtgg
tcggccgaagtcgccggaatcgaagactggatgttcgacgaatgctatgaagttgtcggc
gaccttgcagaagttatggcgctgattttgccggcacctcagtcgcagtctgatgtcccg
ttgcacgaatgggtaacccaaaggctgctgcctttgaagaagctttgcgaacccgaacaa
cgttctgcgatggtggaatactggcaacagcttgaccagaccgaacgcttcgtgctgcac
aaactgatgacgggcgcgtttcgagttggcgtgtcgcagaagatggtggtgaaagcgttg
gcgcaacgcttcggattgccttccgaagtactggctcaccgtttgatgggcgactgggaa
ccgtccgctgaattcttcaattcgctgatgaatgccgacaccggggacgctcacatcagc
caaccgtatccgttttttctggcccatcccctcgaagcctatgtcgaaacactcgggcct
gtcacagactggcaggccgaatggaagtgggatgggattcgtgctcagttgctgaaacgt
gatgatcagtttttcatctggtctcgcggcgaagaattaatgacggatcgtttcccggaa
ctcaccgccatcgccgatagcgttcccaacggctcagccgtagacggagaaatcgtcgcg
ttcaaagacggtgggattctgccattcagccaaatgcagcgacgcatcgggcgaaagaag
cctggcaagaaaattctcagcgatattcccgtctcgtttatcgcctttgatctgctggag
tggcagggcagggatgtgcgtgaggaaccgctcacatttcggaggcagcaactacaggga
atcgtggacgccgttgccacagaaaatccaaacaccgcgattcagctttcgaaggaactc
ccctgccagtcatggagtgacctcgcagagctacggcagcagagccgtgagaatcaggcg
gaaggtctgatgctgaaacggcgagacagcccataccgagtcggccggcctcgcggcgac
tggtggaagtggaagatcgagccgtacaccgttgacgcggtgctgacctacgctcaacga
ggcagcggtcgtcgagcaagcttgtacagcgactacacgttcggaatctggaacgacggc
gaactggtcacattcgcgaaggcttactcgggactcaccgatgaagaaattgcggaggtt
gaccgattcgtccgggccaacacgctggaacgttttggaccggtccgcagcgtgacgcca
aagctggtctttgagctcgcgtttgaaaacattcaagtcagcaagcgtcacaagtccggt
atcgccgtccggtttccacgcatcattcgctggcgacacgacctgaagattgaggctgca
gacagtctggagtatgtgaaagcgatgatcgagtag

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