Ferrovum myxofaciens: HO273_07980
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Entry
HO273_07980 CDS
T06614
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
fmy
Ferrovum myxofaciens
Pathway
fmy00550
Peptidoglycan biosynthesis
fmy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fmy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HO273_07980 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fmy01002
]
HO273_07980 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fmy01011
]
HO273_07980 (dacB)
Enzymes [BR:
fmy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HO273_07980 (dacB)
Peptidases and inhibitors [BR:
fmy01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HO273_07980 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
fmy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HO273_07980 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QKE38673
LinkDB
All DBs
Position
complement(1709928..1711463)
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AA seq
511 aa
AA seq
DB search
MWILIWGGMSCADPVPFPPVSQELPQILRQALAQAGVPASEVSVVVWGVNEPRPRLAWEA
QTPRNPASVMKLVTTLAALENWGPAKTWRTEVRVPRLDTQRGQGPFGVIGVGDPGLTLER
WQELWRQVYQQGIHQLSGPIRFDQSGFSPTELSPEIFDQEGFRAYNVIPHALQVGQQTQW
WFIRPGARVGEPLQIWSEFPFSQIVLSNRTRTVSGPCPALWRSGLHYAIRAKFPAQAMRS
HPDNYLDTGVILELTGTVPQDCGVQVMGFSLLTNFAYLDSSLRTLWHELGGTFAGTLEQG
TVPGDWPVLASSESPALIELLLQMNKNSNNVLARTLLLDLAMNDSEVVKAATESGGRAKV
LRILAERGLDFPEMVLENGSGLSRKARISAEHLARLLLWMQEKSLYGNEFMTTLPLVNVD
GTLRHSFEDPQLRGRFHLKSGTLDGVKALAGYGLDAQNHWVVVVFLANGPGAESTAAAQE
ALLRWVRHESKIPQFNTTSNAMVLPAPNPLR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctgatctggggtgggatgtcctgcgctgaccctgtgcctttcccccccgtt
tctcaggaacttcctcaaatcctgcgtcaggcactggctcaggccggtgtcccggcttca
gaggtttcagtcgtggtctggggggtcaacgaacctcgtccccgcctggcttgggaggct
caaacaccgcgtaatccagcttccgtcatgaaattggtgacgaccctggcggctctggaa
aattggggtcctgccaaaacctggcgcacggaagttcgcgtgcctcgtttggatacacag
aggggacagggccctttcggagtcatcggggtgggagatccgggattgaccctggagcgt
tggcaagaactttggcgtcaagtttatcaacaggggattcatcaactgtcaggaccgatt
cgttttgatcagagtggtttttcccccacggagttatcccctgaaatcttcgatcaggaa
ggttttcgagcctataacgttattccccatgccctgcaggtgggacaacagacccagtgg
tggttcattcgtcccggtgcacgggttggcgaaccgctccagatctggtcggaatttcct
ttctcccagatcgtgctaagcaatcggacccgcaccgtcagtggtccctgccctgccctg
tggcgttcaggattgcactatgccattcgtgccaaatttccggcacaggcgatgcgatcc
catcccgataactatctggatacaggggtgattctggagttgacggggaccgtgccacag
gattgcggggttcaggtcatgggtttttccttgctcaccaatttcgcctatctcgattcc
tcccttcggactctgtggcatgagttgggaggaacgtttgcggggaccctggaacaaggt
accgtgcccggagactggcccgtgctggcctccagtgaatctcctgctttgatcgagttg
cttctgcaaatgaacaagaacagtaataatgtactggcacgaacattgttgctcgatctg
gcgatgaacgactcagaggttgtcaaggcagcgacggagtcgggtggtcgagccaaagtc
ctgcggattttggcggaacgagggttggattttcctgaaatggtgctggagaatggttcc
gggttatcgcgcaaggcgcgtatttctgcggaacatctggcgcgcctgttactttggatg
caggagaaaagtctttatgggaatgaattcatgaccaccctgccgctggtgaacgtggat
ggaacgttgcgtcattcttttgaagatccccaattacgcggtcgctttcatctcaagagt
ggtacgttggatggtgtgaaagccttggcgggttacgggctggatgcgcaaaaccattgg
gtggtagtggtctttctggccaatggaccgggggcagagagtacggcagcagcccaggaa
gccttgctccgatgggttcgtcatgagtcaaaaataccacagttcaacactacttcaaat
gcaatggtattgcctgcaccaaaccccttgcgctaa
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