Fusobacterium animalis 7_1: FSDG_00251
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Entry
FSDG_00251 CDS
T03612
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
fne
Fusobacterium animalis 7_1
Pathway
fne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSDG_00251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fne03019
]
FSDG_00251
Messenger RNA biogenesis [BR:
fne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FSDG_00251
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Ortholog
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GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
PDEase_II
Cas_CT1975
Motif
Other DBs
NCBI-ProteinID:
EEO41692
UniProt:
A0A140PQU7
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All DBs
Position
complement(1374844..1376739)
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AA seq
631 aa
AA seq
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MKKEKQGKQTQLRNNKISIRDKIMSIKDDVLNLKSKKVKNKVVKKVTEKEKKKKEEIQKV
EVIQNNAKKTKTSKKDLDKMYVIPLGGLEEVGKNCTIIQYKDEIIIVDAGAIFPDENLPG
IDLVIPDYTFLENNKSKIKGLFVTHGHEDHIGGIPYLYEKIDKSTAIYGGKLTNALIKSK
FENFGVKKDLPKMVEVGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDF
KIDLTPVDNEKVDFVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATG
RIVVAVFASHVHRIQQIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISS
VDKYDDDEIVILCTGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTN
INNILKYDVDLVFKKIAGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAI
ETGVPKDKILLTQNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSED
GIVIVAYSIDKNTGKIVSGPEMSTKGFVYYKDSEDTIKEAQDLLGKKISKNETYLGRDWA
DLKGNVRDLLSRFFYEKLKRNPIILPMLLEI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagagaaacaggggaaacaaacacagttgaggaacaacaaaattagtattcgt
gataaaataatgagtattaaagatgatgttttaaatttaaaaagtaaaaaagttaaaaat
aaagtagttaaaaaagtaactgaaaaagaaaaaaagaaaaaagaagaaatacaaaaagtt
gaagtgattcaaaataatgccaaaaaaacgaaaacttcaaaaaaagatttggataaaatg
tatgttattccactaggtggtttagaagaagttgggaaaaactgtactataattcagtat
aaagatgaaataattattgtagatgcaggagcaatatttccagatgaaaatttacctggt
atagatttggtgattccagactatacttttttggaaaataataaatctaaaataaagggt
ttatttgtaactcatggacatgaggatcatattggaggaataccttatctgtatgaaaaa
atagataaatctactgctatttatggtggaaaattaacaaatgctttaataaaatctaag
tttgaaaattttggagtaaaaaaagatttaccaaaaatggttgaagttggttcaagaagt
aaagtgagtgtaggaaaatattttacagttgaatttgtaaaagtaacacattcaatagca
gattcttattctttatctgtaaaaacaccagcagggcatgtatttttaacaggagatttt
aaaatagacttaactcctgttgataatgaaaaagtagatttcgtgagattatcagaatta
ggagaagaaggagtagatttaatgctatcagactctactaactctgaggttgaaggtttt
accccatctgaaagaagtgttggggatgcttttagacaagaatttcaaaaagctactggg
aggatagttgtagctgtatttgcctcacatgttcatagaatacaacaaattatagataca
gcagcacaatttaaaagaaaaattgctattgatgggagaagtttattgaaagtgtttgaa
atagcacctagtgttggaagattaactatacctgaaaatttacttattcctatatcatca
gttgataaatatgatgatgatgaaattgtaatattatgtacaggaacacaaggagaacca
ttagctgcactttcaagaatagctaaaaatatgcataaacatatagctttaagagaagga
gatactgtaataatttcatctacacctataccaggaaatgaaaaagcagtttcaactaat
ataaataatattttaaaatatgatgttgatttagtttttaaaaagattgcaggtatacat
gtgtcaggacatggaagtaaagaagaacaaaaactgatgttaaatttaataaatccaaaa
cattttatgccagttcatggtgaatatagaatgcttaaagctcatatgagatctgccatt
gaaacaggagttcctaaggataaaattcttttaactcaaaatggagataaagtagaagtt
accaaagaatatgcaaaaataaatggtaaagtaaattctggtgaaattctagttgatgga
ttaggtgttggagatattggaagtaaggttataaaagacagacaacaactatcagaagat
ggtatagtaatagttgcttattctattgataaaaatacaggaaaaatagtttcaggacct
gaaatgtcaacaaaaggttttgtatactataaagattcagaagatactataaaagaggca
caggacttattaggtaaaaaaataagtaaaaatgaaacttatttaggtagagattgggca
gatttaaaaggaaatgtaagagatttactatcaagatttttctatgaaaaattaaagaga
aatccaattattttacctatgttattagaaatataa
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