Fusobacterium necrophorum subsp. funduliforme: BSQ88_04655
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Entry
BSQ88_04655 CDS
T06168
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fnf
Fusobacterium necrophorum subsp. funduliforme
Brite
KEGG Orthology (KO) [BR:
fnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fnf03400
]
BSQ88_04655
DNA repair and recombination proteins [BR:
fnf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSQ88_04655
Archaeal homologous recombinant proteins
BSQ88_04655
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_29
AAA_21
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
AYV92998
UniProt:
A0A162JAR8
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Position
complement(950473..953238)
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AA seq
921 aa
AA seq
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MRIKKVQLKNYRSHSEIEVEFSRGINLILGRNGKGKSSILEAIGLALFHIKDRTGKSTGK
TFLKYGEKECSILVEFLANDGREYSIFHQYFEKKGKIMILKDLSTELEYRDGIEEKLEDL
CGIKSEYRDVYENVIVAKQNEFINIFKETPENRAKIFNKIFHTEIYANLFSNLKGLSEQY
QKEKEELETAERVLSATLGNRKESFAACREEEKAFILWTRRKEEELQKKRKLTKELEEWE
KIEKEYEVINSSLSLQKTQIEQNKKEFLQHLSEAKRAKKARCLLEEHQSSYDEYTNLEKQ
IQEKKKEQEVLQKIREENRRLKVENEKLELLREKNRKEEEILQGEHSEYGIQLLSLQKKI
RENRKSKEEITLILSDLQQSRKEMEASKEKQKEWEKESVLLQKQVFLEEKHWKEKTERIS
NLDIESIQSSLEQIQAAKIKLQGKREKLVVYQQNIEDYQTAMETLKQKVCPFLKETCENV
KNLEVESYFREEMNKTKIEMEKLSKEIATLQKELEQEQSYRKQEVSYKLLKEEADSLEKT
FLYHRGLWKEVQLHLEREQRHLERLLLVHKFSNLEEIQQKIRALEDSLLVLKVEEKEKEA
EEFNKKIFTLENRIQNLEKERTYFIEKRKENESKIQEEKEECWKTISEEIETLEEKRKHL
QASYQIYLENKKLALPLEEIKEKIYALCLERKERRKVQKSLEKQKEHLETRLRKNDKTAC
KENLAEVEKFLLQINKRLGEIGQKIKHHKQELECLKAQEEKIKELAGKRNKIEKKWKKAE
NIRKNIKEMGTEVSKNMLAHISEGATINFHKITGRSEKICWSNEDNDKYQVYLSGANQKI
EYHLLSGGEQVSVAIAIRGSMAQYFSNSRFMILDEPTNNLDLEKRKLLAEYMGEILHHLE
QSIIVTHDDTFREMAEKIIEL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcggattaagaaagttcaattaaaaaattatcgctctcattccgagatagaagttgaa
ttttccaggggaatcaatctgattttaggaagaaacggaaaaggaaaatcttccattttg
gaagcaatcggactcgctttatttcatatcaaagatagaaccggaaagtccacagggaaa
acctttctcaagtatggagaaaaagaatgcagtattctggtcgaatttctggcaaatgat
ggaagagaatactctatttttcatcagtattttgagaaaaagggaaaaatcatgatattg
aaagatttgagcacagaactcgaatatcgagacggaatcgaagaaaaattggaagattta
tgtggaatcaaatcggaatatcgagatgtctatgaaaatgtcatcgtggcaaagcaaaat
gaatttatcaatattttcaaagaaactcctgaaaatcgagccaaaatttttaacaaaatc
tttcataccgagatttatgcaaatcttttttcgaatttaaaaggactttcggagcaatat
caaaaggaaaaagaagaattggaaacagcagaacgtgttctttccgctactctgggaaac
agaaaggagagctttgctgcctgccgggaggaagaaaaagctttcattctttggacgaga
cgaaaggaagaagagcttcaaaagaaacggaagctgacaaaagaattagaagaatgggaa
aagatagagaaggaatacgaagtcataaactcttctttgtctcttcaaaaaactcagata
gaacaaaataaaaaagaattcctccaacatctttcggaagcaaagagagcaaaaaaagcg
agatgtctgttggaagaacatcaaagttcctatgacgaatatacgaatttggagaaacag
atacaggaaaagaaaaaagagcaggaagttttgcaaaaaattcgagaagaaaatcgaaga
ctgaaagtggaaaatgaaaaattggagcttttaagggaaaaaaatcgaaaagaagaagag
atattgcaaggggaacattctgaatacggaatacaacttctaagccttcaaaagaaaata
cgggaaaatagaaaaagcaaagaagaaatcacactgatcttgtccgacttacaacaatcc
cggaaagagatggaagcttccaaagaaaaacaaaaagaatgggaaaaagaaagtgttctc
ttgcaaaagcaagtatttctggaagaaaaacattggaaagaaaaaacggaaagaatatca
aacttggatatagaaagcattcaatcttccttagagcaaattcaggcagctaagataaag
ctgcagggaaaacgggaaaaactggtcgtctatcaacaaaatatagaagactatcagacg
gctatggaaacattgaagcaaaaggtatgtccttttttgaaagaaacttgtgaaaatgtt
aaaaatcttgaagtagagagctatttccgagaagaaatgaataaaacgaaaattgagatg
gaaaagctttcaaaagaaatagccactttgcaaaaagagttggagcaggaacaaagctat
cgaaaacaggaagtttcttataagcttctgaaagaggaagcggacagcttggaaaaaact
tttttatatcatagaggactatggaaagaagtacaactccatctcgaaagagaacaacgt
catttggaaagactcttacttgtccataaattttccaatttagaagaaatacagcagaaa
ataagagctttggaagattctcttttagtattgaaagtggaagaaaaggaaaaagaagcc
gaggaatttaacaaaaaaatcttcactttagagaacagaatccaaaatttagagaaggaa
agaacttatttcatagaaaaaagaaaggaaaatgagtctaaaatccaagaagaaaaagaa
gagtgttggaaaacaatttctgaagaaatagaaactttggaagaaaaaagaaaacacttg
caagcttcctatcaaatttatctggaaaataaaaaattagcccttcctttggaagaaatc
aaggaaaaaatatatgctctatgtttggagagaaaagaaagaagaaaagtccaaaagagc
ttggagaaacaaaaggaacacttggaaacaaggttacggaaaaatgataagacggcttgt
aaagaaaacttggcggaagtggagaaatttcttcttcaaatcaataaaaggcttggagaa
atcggacaaaaaataaagcatcacaaacaagaattggaatgcctgaaagcacaagaagaa
aaaatcaaagaacttgccggaaagagaaataaaatagagaaaaaatggaagaaagcggaa
aatataagaaagaatattaaagaaatggggacagaggtttccaagaatatgttagctcat
atcagtgaaggagccacgatcaattttcacaaaatcacagggagaagtgaaaaaatctgc
tggagcaacgaagataatgacaaatatcaagtctatttatcgggagcaaatcagaaaatc
gaatatcatctattgtcaggaggagaacaggtttccgttgccattgctattcggggaagc
atggctcaatattttagtaattcaagatttatgattttagatgagccgaccaataatttg
gatttggaaaaaagaaaacttttggcagagtatatgggagagattttacatcacttggag
caaagtattattgtgacgcatgatgatacatttcgagaaatggcggaaaaaattattgaa
ttatag
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