Formosa sp. Hel3_A1_48: FORMA_17060
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Entry
FORMA_17060 CDS
T04482
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
foh
Formosa sp. Hel3_A1_48
Pathway
foh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
foh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FORMA_17060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
foh02000
]
FORMA_17060
Enzymes [BR:
foh01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FORMA_17060
Transporters [BR:
foh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FORMA_17060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
ABC_ATPase
AAA_22
nSTAND3
AAA_29
AAA_24
AAA_16
ATP-synt_ab
G-alpha
DUF87
APS_kinase
AAA_5
MMR_HSR1
DEAD
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AOR26856
UniProt:
A0A1D7XU65
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Position
complement(1815896..1817725)
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AA seq
609 aa
AA seq
DB search
MKEIINQLLPFIKDYKKHVVLNIVFNLLYAFFSTLAFVSLIPMLNVLFDKTQNVSEAPVW
TGIGNIKNYGNNLLNYKVSGLLEEGNAQMALLIVVAIVIFTFFLKNLFGYLSMQHVMYLK
NGVLTDLRKHMYKHIVELPISFYSKRKKGDIMARILGDISEMQNSFFIILELIVREPLTI
LFSLVVMFTMSWELSIFVLLFIPISGFLISSIGKRLKRQSLQTQQEVGRLISTVEETLSG
LKIIKSYNAENAFKKRFLSSADKILRLINKIGLKNNLAGPLSEFLGIITIAILLWYGGKL
VLIEKVIEGTTFIGFMALAYGILTPAKAISKASYKVKNGIAAADRVFEILKESDTMPDLK
KAKELTSFESSIELKNVSFKYDNEFVLKDFSLTVHKGQTVALVGQSGSGKSTIANLLTRF
YDVNKGLITIDNNDIKNITKTSLRSQIGLVTQDSILFNNSIRNNLKIGNENANEDEMINA
LKVANAWEFVKELPEGIDTNIGDSGNSLSGGQKQRLSIARAVLKNSPIMVLDEATSALDT
ESEQLVQVALENMMKNRTSIVIAHRLSTIQNADLIIVMKQGQIVEQGKHQELLDRKGMYQ
KLVLLQSLD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatcattaatcaattattgccattcataaaggactacaaaaaacatgttgta
ctcaatattgtttttaatttattgtacgccttttttagcacccttgcttttgtttcgcta
attcccatgcttaatgttttatttgataaaacacagaacgttagtgaagctcctgtgtgg
actggcattggaaatatcaaaaactatggcaataacttattaaattataaagtttctggt
ttgttagaagaaggcaatgcacaaatggcgttacttatagtagttgctattgttatattt
acattttttcttaaaaatctcttcggatatttatcgatgcaacacgtcatgtatctaaaa
aatggagttttgaccgacttgagaaaacacatgtataaacacattgttgaactccccatt
agtttttattccaagcgaaaaaagggcgacatcatggcacgaatcttaggcgatataagc
gaaatgcaaaactccttttttatcattttagagcttatcgtcagagaacctctcactatt
ttattttcattggttgtcatgtttaccatgagttgggaactttcaatatttgttttactt
tttatccccatttcaggatttttaatttcaagtattggcaaacgactaaaacgacaatca
cttcaaactcagcaagaagtcggtcgtctaatatctactgtggaagaaaccttaagcgga
cttaaaattattaaaagttacaatgcagaaaatgcattcaaaaagcggtttttaagttct
gcggataaaattctcagactcattaataaaattggattaaaaaataatttagcgggccct
ttaagtgagtttttaggcatcattaccatagcaatccttttgtggtacggtggaaagctc
gttctaattgaaaaggtaattgaaggcactacatttataggatttatggccttagcttac
ggtatattaactcccgcaaaagcgatcagcaaagcctcgtacaaagttaaaaatggtatt
gcagctgcagaccgcgtgttcgagattttgaaagaaagcgacactatgccagacttaaaa
aaagctaaagaattaacctcatttgaatcctcaatagaactaaaaaatgtgtcatttaaa
tacgacaatgaatttgttttaaaggatttttcattaactgtacacaaaggacaaaccgtg
gctcttgttggtcaatcagggagtggcaaatctactattgctaatctactaacgcggttt
tatgatgtcaacaaaggattgataacaatagataataatgatattaaaaacatcactaaa
acttctctgaggtcgcaaattggattagtgacacaagactccatattattcaacaacagc
ataagaaacaatctcaaaattggtaacgaaaatgctaacgaagatgaaatgattaatgct
ttaaaagtagctaacgcttgggaatttgtaaaggaattaccagaaggcatagatacaaat
ataggagatagtggaaacagtctttcgggaggacaaaaacagcgtttaagtattgcaaga
gcagtactcaaaaactcaccaattatggtcttggacgaagccacctccgctttagatacc
gaaagcgagcaattagttcaagttgcacttgaaaatatgatgaagaatagaacatcgatt
gttattgcacaccgcctttcaacgatacaaaatgctgatcttatcatagtgatgaaacaa
ggtcaaattgtagaacaaggcaagcatcaagagcttttggatcgaaaaggcatgtaccaa
aaacttgttttattgcagtccttagactaa
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