Falco peregrinus (peregrine falcon): 101911883
Help
Entry
101911883 CDS
T02856
Symbol
SKIV2L2
Name
(RefSeq) Ski2 like RNA helicase 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
3.6.4.13
]
Organism
fpg
Falco peregrinus (peregrine falcon)
Pathway
fpg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101911883 (SKIV2L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpg03019
]
101911883 (SKIV2L2)
03041 Spliceosome [BR:
fpg03041
]
101911883 (SKIV2L2)
03009 Ribosome biogenesis [BR:
fpg03009
]
101911883 (SKIV2L2)
03016 Transfer RNA biogenesis [BR:
fpg03016
]
101911883 (SKIV2L2)
Messenger RNA biogenesis [BR:
fpg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
101911883 (SKIV2L2)
Spliceosome [BR:
fpg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101911883 (SKIV2L2)
Complex C
U4/U6.U5 tri-SnRNP related factors
101911883 (SKIV2L2)
Ribosome biogenesis [BR:
fpg03009
]
Eukaryotic type
Pre-60S particles
Helicases
101911883 (SKIV2L2)
Transfer RNA biogenesis [BR:
fpg03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
101911883 (SKIV2L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
101911883
NCBI-ProteinID:
XP_005242046
LinkDB
All DBs
Position
Un
AA seq
1035 aa
AA seq
DB search
MADAFGDELFSVFEDDSTAAAASGAKKSKTGATEGARKPGKRLEEKSSVAATGKPKGEAE
VCSTEDVVLAKKIKLEDVVSEDANLADLMPQVKVQAVETVEGCTHEVALPADEDFTGLKP
RTGKAAKEYPFILDAFQREAILCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIF
TSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVA
WVIFDEIHYMRDPERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVI
YTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQRGRKGG
TKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNA
IDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAM
GINMPARTVLFTSASKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTI
GKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRTIPEIVEKVNN
LEGQYNKIAIPNEENVVIYYKIRQQLAKLGKEIEEYVHKPKYCLPFLQPGRLVKVKNEGD
DFGWGVVVNFSKKSNVKPNSGELDPLYIVEVLLHCSKESLKNSATEAAKPARPDEKGEMQ
VVPVLVHLLSAISSVRLYIPKDLRPIDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKD
QGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAMDIKAAKRELKKARTVLQ
MDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATA
LLSCFVFQENSSEMPKLTEQLAGPLRQMQECARRIAKVSAEAKLEIDEENYLNSFRPNLM
DVVYTWANGANFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGI
TKIKRDIVFAASLYL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcatttggagatgagctcttcagcgtgtttgaggatgactcgaccgccgcc
gctgcctctggggccaagaagagcaaaacgggcgccaccgagggcgccaggaaaccggga
aaacgactggaggaaaaatcttcagtagctgcgacagggaagcccaaaggggaggctgag
gtctgtagtaccgaagatgttgttttggcaaagaagataaaattggaggatgttgtatca
gaagatgctaatctggcagacctgatgcctcaagtaaaggtgcaagctgtggaaactgtt
gaaggctgtacgcatgaggttgcacttccagcagatgaagacttcacaggtttgaagcca
agaactggaaaagctgcaaaagagtatccgtttattcttgacgcctttcagagagaagct
attctttgtgttgataataaccagtctgtgttagtgtcggctcatacgtcagctggtaaa
actgtttgtgcagagtatgcaattgccctggctttgagggagaaacagcgtgtgatattt
acaagtccaattaaagctttgagtaatcagaagtaccgtgagatgtatgaagaatttcag
gatgttggtttgatgactggagatgtcactattaatcctacagcttcttgtctggtaatg
acaacagagattttgagaagtatgctctacagaggttctgaggttatgcgagaggttgcg
tgggttatttttgatgaaattcactatatgagagatccagaacgcggtgtggtttgggaa
gagacaattattttgctccctgacaatgttcattatgtgttcctttctgcaactattcca
aatgcccgtcagtttgctgaatggatctgccatcttcacaaacagccttgccatgtgatt
tacactgactatcgacccactccactgcagcattatatattcccagcaggaggagatgga
ctccatctggttgttgatgaaaatggagatttcagagaagataattttaatacagcaatg
caagtacttagagatgcaggagacctagcaaaaggggaccagagaggcaggaaaggagga
acaaaaggtccttcaaatgtttttaaaattgtgaagatgatcatggaaaggaatttccaa
cctgtcattattttcagcttcagtaagaaagactgtgaagcctatgcacttcagatgaca
aagttagatttcaatacagatgaagaaaaaaagatggttgaagaagtgttcaataatgca
attgattgtctctcagatgaagataaaaagcttcctcaggttgagcacgtacttcctctt
ctgaagcgaggaattggtatccatcatggcggtctgcttcctatcttaaaagaaaccata
gaaattcttttctctgagggcttaataaaggccttatttgcaacagagacttttgctatg
ggaattaatatgccagccaggactgtgctatttacgagtgccagcaaatttgacggaaaa
gatttccgatggatatcctcaggtgaatacattcaaatgtcaggtcgtgcaggacgccga
ggtatggatgatagaggaatagtaattcttatggtggatgaaaaaatgagtccaacaatt
ggcaagcagcttttgaagggttcagctgatcctttaaacagtgcattccacctgacgtac
aacatggtattgaacttgcttcgagtagaggaaattaatcctgaatacatgttagaaaaa
tccttctatcagttccaacattacagaactattccagaaatagtagaaaaagtgaataat
ttggaaggacagtacaacaaaatagcaattcccaatgaggaaaatgtggtcatatactac
aaaatccgacagcagcttgcaaaactgggtaaagagattgaagaatatgttcacaaacca
aagtattgcttgcccttcctacagccaggaagactagtaaaggtgaagaatgaaggtgat
gactttggatggggagtggttgttaatttctctaagaaatcgaatgttaagccaaattct
ggtgaattggacccattatatattgttgaagtgctactacactgcagcaaagagagtttg
aaaaattctgctactgaggctgcaaagccagccagacctgatgagaaaggagagatgcag
gttgttcctgttttggtacatcttctctcagctatcagcagtgtccgactctacataccg
aaagacctgaggcccattgacaacaggcaaagtgtgttaaaatctatacaagaagtacag
aaacgatttcctgatggagtaccattactagaccctattgatgacatgggcatcaaagat
caaggactgaaaaaagtaatccaaaaagtagaggcatttgagcataggatgtattcacat
cctcttcacaatgatcccaacttggaaactgtatacacactttgtgaaaaaaaagcacag
attgctatggatattaaagcagcaaagcgagaactgaaaaaagccagaactgtcttacaa
atggatgaactgaaatgccgtaagcgtgttttgagaaggctggggtttgctacatcttca
gatgtcattgagatgaaaggacgggttgcttgtgaaatcagcagtgctgatgaactactc
ctgacagaaatgatgttcaatggtctcttcaatgacttatctgcagaacaggcaactgca
ctattaagctgttttgtatttcaagagaattccagtgaaatgccaaaactgacagagcag
ctggcaggaccgcttcggcaaatgcaggagtgtgcaagaagaattgccaaggtgtcagca
gaagccaaactggaaattgatgaagaaaattacttaaattctttcagacccaatctaatg
gatgttgtgtatacatgggcaaatggagctaactttgctcacatctgcaaaatgactgat
gtctttgaaggtagcataattcgttgcatgagaaggctagaagaattgctccgtcagatg
tgtcaggctgcaaaagccattggaaacacagagttggaaaataagtttgcagagggaatt
acaaaaatcaagagagatattgtgtttgctgcaagcctttacctgtaa
DBGET
integrated database retrieval system
