Flavobacterium psychrophilum v4-33: IA06_00730
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Entry
IA06_00730 CDS
T03661
Name
(GenBank) ATP-dependent helicase
Organism
fpk
Flavobacterium psychrophilum v4-33
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_12
PDDEXK_1
AAA_11
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
AIG40429
LinkDB
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Position
complement(168360..171518)
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AA seq
1052 aa
AA seq
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MKTPAFSIYNASAGSGKTYTLVKEYLKIILKAKHNDAYKNILAITFTNKAVFEMKTRIID
SLFDFSKDNPTEKSIQLMNDLGKEINLNQSQIKTKAQSIIKNIIHNYAAFDISTIDKFTH
KVIRAFAFDLGLPITFDVSLDTENLLQEAVDAIVAQAGEDQVLTKLLVDFTMEKTDDDKS
WDISSEIMNTGRLVLNENYREEILSLKDKTIPEFIALKAKLEETCKSLENQNINLANEAV
LLIDSQGIDTKSFSRETFPNHLGFIQRSELKPTHKKFRTVDDIAVNKNAKDKDIIEGIAN
ELIFILYKVYKNYEKKDFYQAFLKNITPLSLLNTVSNELAKIQEDQNILSISEFNKLIFE
HIQNQPAPFIYERLGEKYKHFFIDEFQDTSEMQWQNLIPLIDNALSSEDLQGIQGSLMIV
GDPKQSIYRWRGGKAEQFIDLAKTKNPFSNKDKEVFNLETNYRSFEAVIDFNNDFFKFLS
QKFSNEDYKDLYENYSFQKSNAKKGGYVNISFIPEIDTDFVSEEDEENIDKNDIYLTTTL
QTIIKVAAEGFLYNEIVLLTRNNKHGILLANYLTENDIPVISSESLLINASSEVKFILNM
LRYLNDKNDIESLANGLYYLDQNLENNIETHDFIYQGIQYKDEIELEKWLANFGIQLSFQ
NSRRKSLYEIAELIAAKCINSENNNAYVQYFLDIVLERDVKYQMGISDFLEYWDKNGHKL
SIPSAEGSNAIRIMTIHKSKGLEFPVVIFPFVEENYSAPKREKMWIDSQSDDLDFDKFLI
DKSSKVKEYGENAASVYNQKSQEDLLDNINVLYVALTRAEEQLFIISNSKKRNSKGELPN
NSASFFIEFLEDYKNFDSNILNYEFGNCKRISKQKPLEAKRKNIEAINSVINPNAIKIAQ
RESLMWGTHQQEAIEFGNVLHEILSFIQTKKDIPLALKKALETGLISENQQEEVAKTVIE
IVFHPELNDFFHENSKVYNEQSIIKKGLQTIKPDRVTISGQNAYLLDYKTGKHQSKYENQ
LKEYELALIEMGFNVQKKSLIYIGENLEIVHL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacccgcattctctatatacaacgcatcagctggctcaggaaaaacctacaca
ttggtcaaagaatacctaaaaattattctaaaagccaaacacaacgatgcgtacaagaac
attctcgccataacctttaccaacaaagcggttttcgaaatgaaaaccagaattatagac
agccttttcgatttttctaaagacaatcccacagaaaaatcaatccaattaatgaatgat
ttaggcaaggaaattaatcttaatcaatctcaaattaaaaccaaagcacagtctataata
aaaaacatcattcataattatgccgctttcgacatttcgactatcgataaatttacacat
aaagttattcgtgcctttgccttcgatttgggtttgcccattacttttgatgtttcctta
gacaccgaaaatctcctacaagaagccgtagatgcaatcgtagcacaagcaggcgaagac
caagtactcaccaaactactcgtcgattttaccatggaaaaaaccgacgatgacaaatcc
tgggacatttcgagcgaaatcatgaacacaggaagactcgtgcttaacgaaaattatcga
gaagaaattttgtcgctcaaagacaaaaccattccagaatttattgcccttaaagcaaaa
ttagaagaaacttgcaaatcgttagaaaaccaaaacatcaatctggcaaacgaagccgta
cttcttatagacagtcaaggaattgacactaaatccttttctagagaaacttttccaaat
catttgggatttattcaaagaagcgaactaaaaccaacgcataaaaaatttagaactgtc
gatgatattgccgtcaataaaaacgcaaaagacaaagacattattgaaggcattgccaat
gaactcatttttattttatacaaagtttataaaaattacgaaaaaaaggatttctaccaa
gcttttctaaaaaacatcacgccactttcattactaaataccgtaagtaacgagttggca
aaaattcaggaagaccaaaacattttatctatttccgaatttaataaactcattttcgaa
cacatacaaaaccaacccgcaccgtttatttacgaacgattgggcgaaaagtacaaacac
ttttttatcgatgagtttcaagacacgtccgaaatgcaatggcaaaacctgattccgtta
atagataatgccctatcgagcgaagatttacaaggaattcaaggttcgcttatgattgtg
ggcgatcccaaacagtctatttaccgttggcgtggcggaaaagccgaacaatttatcgat
ttagccaaaaccaaaaacccctttagtaataaagacaaagaagtttttaatctagaaaca
aattatcgaagttttgaagccgtaatcgactttaacaatgatttttttaagtttttatca
caaaaattttctaatgaagattacaaagatttgtatgaaaattatagctttcaaaaatcg
aatgctaaaaaaggaggctatgtaaacatttcttttattccagaaatagataccgacttt
gtttcggaagaagacgaagaaaacatcgataaaaatgatatttacctcacaactactttg
caaaccattataaaagtagctgcagaaggttttttgtataacgaaattgtattgctcacc
agaaataacaaacacggtattttattagcaaattacttgaccgaaaacgacattcctgtt
atttcatccgaaagtttattaataaacgcttcatcggaagtaaagtttatcctaaatatg
cttcggtatttaaatgataaaaatgatatcgaatcgttagccaatggcttgtattattta
gatcaaaatttagaaaataatatagaaacccacgattttatttaccaaggaattcagtac
aaagacgaaatcgaattagaaaaatggttggcaaatttcgggatacagctctcgtttcaa
aatagcagaagaaaatcattgtacgaaattgcagagctcattgcagcaaaatgcattaat
tctgaaaacaacaatgcttatgtacaatatttcttagatattgtgctcgagcgtgatgta
aaataccaaatgggcatttcagatttcttagaatattgggacaaaaacgggcataaactc
agtattccgtcagccgaaggatctaatgccattcggataatgaccattcacaaatcgaaa
ggattagaatttcctgtagttatttttccttttgtagaagagaattatagtgcacccaaa
cgagaaaaaatgtggatcgattcccagtctgacgatttagatttcgacaaatttttaatt
gacaaatccagtaaagtaaaagaatatggcgaaaatgcagcttcggtttacaaccagaaa
tcgcaagaggatttattagacaatatcaatgttttatatgtagcgctaacccgtgccgaa
gaacaactatttattatttcgaatagtaaaaagaggaatagtaaaggagaattacccaat
aattctgcctccttttttatagaatttttagaagattacaagaactttgattcgaatatt
ttgaattacgagtttggcaattgcaaaagaatttctaaacaaaaaccattagaagccaaa
cgtaaaaatattgaagctataaattcagtcatcaatccaaatgctataaaaattgcacaa
cgggaatcactcatgtggggaacgcatcagcaggaagctatcgaatttggtaatgtttta
catgaaattctatcattcattcaaactaaaaaagacattccattagccctaaaaaaagca
ttagaaacgggacttatctcagagaatcagcaagaagaagtagcaaaaacagttattgag
attgtttttcacccagaattaaatgatttttttcatgaaaacagtaaggtatataacgaa
caatctatcataaagaaagggttgcaaactataaaaccagaccgagttactatttccgga
caaaatgcttatttattagattacaaaacaggaaagcaccaatctaaatacgaaaaccaa
ctaaaagaatacgaattggcgctaatagaaatgggatttaatgtacagaaaaaatcactc
atatatataggagagaatttagaaatagtacatttgtaa
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