Flavobacterium psychrophilum v4-33: IA06_03080
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Entry
IA06_03080 CDS
T03661
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
fpk
Flavobacterium psychrophilum v4-33
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpk03021
]
IA06_03080
Transcription machinery [BR:
fpk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IA06_03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AIG40853
UniProt:
A0A075RA82
LinkDB
All DBs
Position
complement(688596..689138)
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AA seq
180 aa
AA seq
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MHDEKDFIAKLLNPKTQNDAFGLLLQLYQKPLYYHVRNMVLNHDDADDVLQNTFVKVFRN
LQNFKGDSKIFSWMYRIATNEAISFMQQRAKKNGISSQQTQLKAINKLESDVYFDGNEMH
IKLQKAIASLPQKQQLVFKMKYFEDLKYEQIAEITGTSVGGLKASYFHAVKKIEVFLKLD
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgacgaaaaagattttattgctaaattattgaatcctaaaacgcaaaatgatgcg
tttgggctgctcttgcaattataccaaaaaccgttgtattatcatgtaaggaatatggtt
ttgaaccatgatgatgcagatgatgttttgcaaaatacgtttgtgaaagtttttcgtaat
ctacaaaattttaaaggcgatagcaaaattttttcttggatgtatcgtattgcaactaat
gaggctatttcttttatgcaacaacgggctaaaaaaaatggaatttcgagccagcaaacg
caactaaaagcgataaataagctggaaagtgatgtgtattttgatggcaatgagatgcat
ataaaattgcaaaaggcaattgctagtttgcctcaaaaacaacaattggtttttaaaatg
aagtattttgaagatctgaaatatgaacaaattgctgaaattacaggaacttcggttggt
ggtttgaaagcttcttattttcatgcagtgaagaaaattgaggtttttttgaaattagat
taa
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