Ferroglobus placidus: Ferp_1480
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Entry
Ferp_1480 CDS
T01172
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpl
Ferroglobus placidus
Pathway
fpl03410
Base excision repair
fpl03430
Mismatch repair
fpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ferp_1480
03430 Mismatch repair
Ferp_1480
03440 Homologous recombination
Ferp_1480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpl03400
]
Ferp_1480
DNA repair and recombination proteins [BR:
fpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Ferp_1480
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ferp_1480
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ferp_1480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
HCMV_UL139
Motif
Other DBs
NCBI-ProteinID:
ADC65631
UniProt:
D3RYR8
LinkDB
All DBs
Position
complement(1266546..1267769)
Genome browser
AA seq
407 aa
AA seq
DB search
MQELMNGDFLKAVKFTAEKLKDVTREVYIVHHNDADGICSALILTIALMRKGRDVKRYCI
EKVHPKIIERIHEGKEDDVIIYTDLGGLALDTIAKIDGGRNYIFLIDHHPAVKVESEKVV
ELDSELLGISGDLFISASSLTYMVARGIDEKNKDLAYLAVIGSVGDYHDRYGGVLGIDRL
SLEEAIRLGQAKIKIEKMRERYYIVPLKNYASDVAKAFTNLGVVGYLEKGYNIAIECTLS
GNVDDAIEKSQEYEKLKERKFKEMIERLKNGELKKERYVQWFHAKDDFYPMGVKAIGEFC
QVTKDMSFFDDDKYVIGFQNVYDYIPDLGEIKLNAVKVSGRTPIPLERKILNGVMPGFDC
LIPEASKAVNGFPDATHKVAAATLIEKGKEEEFIRAFERIIETSQCG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagctgatgaacggtgattttttgaaagcggtgaagttcacagctgaaaagtta
aaagatgtgacgagggaagtgtatatagttcatcataacgatgccgacggaatttgttcg
gctctaattttaacaatagctttaatgaggaagggtagagatgtgaagaggtactgcatc
gagaaagttcacccgaaaataatagaaagaattcacgaaggaaaagaggatgacgttata
atttacacggacctcggcggattggctttggatacgatagcgaaaatcgatggggggaga
aactacatatttctcatcgaccaccatccagcagtaaaagtggaaagcgaaaaagttgtt
gagctcgattcggagcttcttgggatttccggagatctgttcatctccgcctcgagctta
acctacatggtggcgaggggaatagatgagaaaaacaaggaccttgcctaccttgcagtc
ataggctctgtaggagattaccacgacaggtacggaggagtcctcgggatagacagatta
agcctcgaagaggcgataagactcggacaggcgaaaatcaagatagaaaagatgagggag
aggtattacatagttccgctgaaaaactacgcaagcgacgtggcaaaagctttcacgaat
ctcggagttgtcggatacctcgagaagggttacaacatcgcgatagaatgcactctctcc
ggaaacgtagatgatgcgatagaaaaaagtcaggagtacgagaagcttaaggagaggaag
ttcaaggagatgatagagaggttgaaaaacggagagcttaagaaagagcgctacgttcag
tggttccacgctaaagacgacttctatccaatgggagttaaagctataggagagttctgt
caggtaacgaaggacatgagcttcttcgatgacgataagtacgtaatcggttttcagaac
gtatacgattacattccggatttgggagagataaagctgaacgccgtgaaggttagcgga
agaacgccgatacctctcgaaaggaaaattctcaacggagttatgccgggttttgattgt
ttaattccagaagcgagcaaggctgttaacggttttccggatgcaactcacaaagtggcg
gctgcgacgctgatagaaaaaggcaaggaagaagagttcatcagagctttcgaaagaatt
atagagacttctcagtgcgggtaa
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