Ferroglobus placidus: Ferp_2118
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Entry
Ferp_2118 CDS
T01172
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpl
Ferroglobus placidus
Pathway
fpl03410
Base excision repair
fpl03430
Mismatch repair
fpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ferp_2118
03430 Mismatch repair
Ferp_2118
03440 Homologous recombination
Ferp_2118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpl03400
]
Ferp_2118
DNA repair and recombination proteins [BR:
fpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Ferp_2118
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ferp_2118
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ferp_2118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ADC66249
UniProt:
D3S0K8
LinkDB
All DBs
Position
complement(1828985..1830346)
Genome browser
AA seq
453 aa
AA seq
DB search
MDLIKKAYEISERIKKEDEFLIVTHIDADGITSGAIAFETLSRIGKDAKIIFLKQLDEKA
AEKIADENRFVWLTDLGSGNISLLLRRKLEFVISDHHVPEMTYKWQLNPHDFGYDGSYDL
SGSTTTYLVSRCLGLNYDLSPLAIVGAVGDLQDSREAKLVGLNRFVLEEAIKYGYLNAIK
DLRFFGKQTRPVYKMLEYTFDPYLPGISGNEKGAIEFLSSLGVEVKREDWVRWIDLSREE
KRKVVSGIVRVCMEAGYSYELIKKIVGETYVLLEEEEGTELRDAMEYSTLLNATARYGFE
EVGLRVCLGDRDKHFRKARALLQEHRRNLSAGIKLVEEMGIEELEFVQYFHAKSAIPETI
VGIVAGMSYSIASKNKPIVAFAYSEEGVKVSARATKELVERGVHLASAVREAAEAVGGSG
GGHSIAAGATIPRGKEEEFIQLLNKIVGLQLKR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtggatcttataaaaaaagcttacgagatttcagaaaggataaaaaaagaagacgagttc
ttaattgttactcacatagacgccgacggcataacttccggagccattgccttcgaaacg
ttaagcagaattggcaaagatgcaaagatcatctttttgaagcagcttgatgagaaagct
gctgagaagatagccgacgaaaacaggtttgtatggttgaccgatttgggaagcggtaac
atttctcttctcctaagaagaaagctcgaattcgtaatttccgatcaccacgttccggaa
atgacttacaagtggcagctcaacccccacgatttcggatacgacggtagctacgatttg
agcggctcgacaacgacgtatctcgtatctcgatgcctcggtttgaactacgatctttct
cctctcgctatagtcggggcagtaggcgatctgcaggattcccgggaggctaagctcgta
ggactcaacagattcgtgctcgaggaagctatcaagtacggatacttgaatgcgattaaa
gatcttaggttcttcggaaaacagacgagaccggtttacaagatgctcgagtacactttc
gatccgtaccttcccggaattagcggaaacgagaaaggagcgatagagtttctcagctcg
ctcggggtggaagtaaagagagaagactgggtaaggtggatcgatttaagcagagaggag
aagaggaaagttgtgtctggtatagtgagagtttgtatggaagccggatattcctacgaa
cttataaagaagatcgtcggagagacgtacgttcttcttgaggaagaggaaggtacggag
ctgagagatgcgatggagtactcgactcttcttaacgcaaccgcaagatacggatttgag
gaagttggattgagagtttgcttgggagacagagataagcacttcaggaaggcaagagct
cttttgcaagagcatagaagaaacctctccgccgggatcaaacttgtagaagaaatgggg
attgaagaacttgagttcgttcagtacttccacgcaaaaagtgcaattcccgaaacgatc
gtcgggatagttgccgggatgagttattcgatagcttcgaagaataagcccatagtggct
ttcgcttacagtgaagagggagtgaaagtttcagcaagagcgacgaaggagctcgtagaa
aggggggtgcacttagcttctgccgtaagagaggcagctgaggcagtcggaggaagtgga
ggaggacacagcatagctgccggagctactattccgagaggtaaggaagaagaattcatt
cagcttcttaacaaaatagtaggtttgcaactgaaacgttaa
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