Francisella philomiragia O#319-036: LA56_158
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Entry
LA56_158 CDS
T03618
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
fpm
Francisella philomiragia O#319-036
Pathway
fpm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA56_158 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpm03400
]
LA56_158 (uvrA)
DNA repair and recombination proteins [BR:
fpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA56_158 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA56_158 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
AAA_33
AAA_21
AAA_23
Viral_helicase1
DnaJ_CXXCXGXG
cobW
NACHT
Motif
Other DBs
NCBI-ProteinID:
AJI55139
LinkDB
All DBs
Position
172573..175395
Genome browser
AA seq
940 aa
AA seq
DB search
MKKIIIKGAKTHNLKNIDVEIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSSY
ARQFLSMMDKPDVEHIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRVFFARAGTAKC
PVHQIELKAQTISQMVDKILEFDENTRLMILAPIISQKKGTHHTLLDKILAQGYIRVRIN
GEFFNLDEDYPELDRYKKHNIEVVVDRFKPKKDNEQRIAESIETALDLGNGIVKLVDMTN
ETADDILFSSKHACPLCDYSLKELSPRIFSFNSPLGACSSCDGLGVKEFFDEKKVIIDPA
ISLKHGAIVKWNKTNQYYYSQLESLAEHYKFSLDEPFEKLSKKIQEVILYGSGDEAIKMT
VDSIRGGRQTRVKPFEGVIPHFERRYYESDSDMVKKDLYELMSNLKCKSCNGARINEYAR
NIFIEDKNIADVCALSIDDLLKWLDELEFVGQQKVIAENLLKEIRLRVEFLANVGLEYLS
LSRQADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNQRLLDALHNLKDLGN
TVIVVEHDEDAIKQADYIIDMGPMAGVHGGEVVASGDYQAIIKNKKSLTADYLSGRKKIE
VPKTRLKASKNRYVEINGATGNNLQGDNLKIPVGALTCVTGVSGSGKSTLINRTLYPLAS
RLLNRSTLVPMEYKSHKGFNHLDKVIDIDQSPIGRTPRSNPATYTGVFTPIRELFAATAE
SRSRGYSAGRFSFNVRGGRCEACQGDGVIKVEMHFLADVYVACDVCEGKRYNRETLAVQY
KGKNIYEVLEMTVEEALEFYNAVPSIKTRLEALMNVGLSYIKLGQSATTLSGGEAQRVKL
AKELSKRSTGKTLYILDEPTTGLHFYDIHQFLKVIMDLRDRGNTVVIIEHNLDVIKMADW
IVDLGPEGGSKGGQIIFEGTPEDIAKCKKSYTGKYLSNLL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattatcatcaagggtgcaaaaacccataatctaaaaaatatcgatgttgaa
atacctagagataagcttactgttattacaggattaagcggttctggtaaatcttcactg
gcatttgatactttgtatgcagaaggacaaagacgttatgttgagtcgctatcttcctat
gctagacagtttttatcgatgatggataagccagatgttgagcatatagaaggactatct
cctgctatttcaattgatcaaaaaacaacatctcataatccgagatctaccgtcggtaca
gttactgagatatatgattatctgagggtattttttgctagggcaggaacggctaaatgt
ccagttcatcaaatagaacttaaagcacagacaatcagtcagatggttgataaaatccta
gagtttgatgaaaatacacgcttaatgatattagctccaattatttctcaaaagaaaggt
actcatcatactctgttagataagatattagcgcaggggtatattcgtgtacgtataaat
ggagagttttttaatttagatgaagattatccagagttagatcgctacaagaaacataat
atagaagttgtggttgataggtttaagcctaaaaaagataatgagcaacgaattgcagag
tctatagaaactgctttagatcttggtaatggtatcgtcaaattagtagatatgactaac
gaaactgctgatgatattttattctcatctaagcatgcctgtccgttgtgtgattattct
ctcaaagagttatcaccaagaattttttcattcaatagtccgttaggagcttgtagtagt
tgcgatggtctaggagtcaaagaattttttgatgagaaaaaagtaataatagatccagca
atttcacttaaacatggagcaattgttaagtggaataagacaaatcagtattattactca
caattggaatctttagctgagcattataagttctcattagatgaaccttttgaaaaatta
tctaaaaagattcaagaagtaatcttatatggctcaggtgatgaggctattaagatgact
gttgattcaattagaggtggtaggcaaactagggtcaagccatttgagggagttatacct
cactttgagcgtagatactatgagtctgattctgatatggtcaaaaaagacctgtatgag
cttatgagtaatctcaaatgtaagtcttgtaatggtgctagaattaatgagtatgctaga
aatatatttatagaagataaaaatatagcagatgtatgtgccttgtctatagatgattta
ttaaaatggcttgatgaattagaatttgtcggacagcaaaaagttattgcagagaattta
cttaaagagattagattaagagtcgaatttttagcaaatgttggtttggagtatttaagc
ctttcaagacaagctgatactctttcaggtggtgaagcacagcgcattaggctagctagt
caaattggtgctggtctagtgggagttatgtatatattagatgagccctctatcggactt
catcaaagagataatcaacgtcttttagatgcgttgcataatcttaaggatctaggtaat
acagttatcgtcgttgaacatgatgaggatgcaattaaacaagcagattatattattgat
atgggaccaatggcgggtgttcatggtggcgaagtagtagcatctggggattatcaggca
attatcaaaaataaaaaatctttgactgctgattacttaagtggtcgtaagaaaatagaa
gttccaaagactaggctaaaagctagtaaaaatcgttatgttgaaataaatggtgctact
ggaaataatttgcaaggcgataatttaaaaattccagttggagctttgacttgtgtaaca
ggggtatcaggttctggtaaatcaactttgataaataggacactataccctttggcatct
agattactaaacagaagtacgcttgtacctatggaatataaatctcacaaaggatttaac
cacttagataaggttattgatattgatcagtcgccaataggacgtactcctcgttctaat
ccagctacatatacaggtgtttttactcctataagagagttatttgcagctactgcagaa
tcaagatcaagggggtatagtgctggcagatttagttttaatgtgcgtggtggtagatgt
gaagcttgtcaaggtgatggtgttataaaagttgaaatgcacttcttggcagatgtttat
gttgcttgtgatgtttgtgaaggaaagcgttataatcgtgaaactcttgccgtacagtac
aaaggaaaaaatatatatgaagtattagaaatgactgtggaggaggctctagagttttat
aacgctgttccgagtatcaagactagattagaagctttaatgaacgttggattgtcttat
attaagttaggccaaagtgcgactactttatctggtggagaagctcaaagagttaagcta
gctaaagagctctcaaaacgctcaacgggtaaaactttatacattttagacgaaccaaca
actgggctacatttctatgatatccatcaatttctaaaagtaattatggatttacgtgat
agaggtaatacagtagtaattattgagcataatcttgatgttattaaaatggctgattgg
atagtagatttaggtccagagggcggaagtaaaggtgggcagataatttttgaaggaacg
cctgaggatattgctaaatgtaaaaaatcttatacggggaagtacttaagtaatttactt
tga
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