Flavobacterium psychrophilum JIP02/86: FP1975
Help
Entry
FP1975 CDS
T00548
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fps03032
]
FP1975 (topA)
03400 DNA repair and recombination proteins [BR:
fps03400
]
FP1975 (topA)
Enzymes [BR:
fps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FP1975 (topA)
DNA replication proteins [BR:
fps03032
]
Prokaryotic type
DNA Topoisomerases
FP1975 (topA)
DNA repair and recombination proteins [BR:
fps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FP1975 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Motif
Other DBs
NCBI-ProteinID:
CAL44039
UniProt:
A6H115
LinkDB
All DBs
Position
complement(1829261..1831777)
Genome browser
AA seq
838 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGADFQVESSYGHIADLPSKEIGVDVLNGFTPKYEVSPDK
KALVTKLKGLAKKADMVWLASDEDREGEAISWHLAEELKLDPKKTKRIVFHEITKTAILK
AIENPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKIKGGLSAGRVQSVSVRLIVERER
EIINFKPVATYSVQAEFTNEAGKSFKAKLPKNFNTKKEAEDFLNKNIGSIYKVGDLETKP
TKKTPAGPFTTSTLQQEAARKLYLPVGITMQLAQRLYEAGLITYMRTDSVNLSKDAMEAA
QAEIIKSYGKEYAKPRTFVNKSKGAQEAHEAIRPTDMSRHTVNIDRDQARLYDLIWKRTL
ASQMADAELERTNVKIEANNHSELFTASGEVIKFEGFLKVYLEGHDDDEEEQEGMLPSMK
VNEKLINNYITATERYSRAAARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGN
LEGQERNYTQLTLQSGKVGEKLLKENTGSDKGKLVPTDIGTIVTDFLVKNFDNILDYNFT
AKVEQDFDEIAEGNMQWAKMMQDFYDKFHPTVKDVEANADRESGERILGIDPKSGKPVSV
RLGKFGPMAQIGAADDEEKTFASLLKEQNIGNITLEEVLKLFLLPKNLGTYKGEEIEVSN
GRYGPFIRFGTTFVSLPKGEEPLNVDLNRAQELIDEKLLADAPIAVYKGEGVQKGTGRFG
PFLKWNGIFINVSTKYNFNNLSQQDIETIIEDKIQKNIDKVIHNWEAEGILVQKARWGRS
EITKGKIKIELSKDFDAAKLTLAEAQEMIAKKTPVKKAPVKKAVAKKPAVKKLVAKKN
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagtcgaatcacctgcaaaggcaaaaacaatcgaaaaattt
cttggagcagattttcaagtagaatcaagttatgggcatattgccgacttgccttctaaa
gaaataggagtcgatgtgttaaacgggtttacacccaaatacgaagtttcgcccgacaaa
aaagccttggttaccaaacttaaaggacttgctaaaaaagccgatatggtttggttagct
tccgatgaggatcgcgagggagaagccatttcttggcatcttgccgaagaactaaaacta
gatcctaaaaaaacaaagcgtattgtttttcacgaaattacaaaaacagctattctaaaa
gcaatagaaaatccacgtgaaatagattataatttagttaacgcacaacaagcgcgtcgt
gttttagacagattagtgggttacgaattatcgccagtattgtggcgaaaaattaaaggt
ggattgtcggctggtcgggtacaatcagtttcagttcgattaattgtagagagagaacga
gaaatcatcaatttcaaaccagttgctacatattctgttcaagccgaatttactaacgaa
gctggtaagtcattcaaagcaaaactgcctaaaaattttaacacaaaaaaagaagccgaa
gattttttaaataaaaatattgggtctatatataaggtaggagatctagaaacaaaacct
accaagaaaacaccagcgggaccttttaccacttcgactttgcaacaagaagccgctcgt
aaattgtatttgccagtgggaataaccatgcaattagcacaacggttgtacgaagcagga
cttattacttatatgagaacagatagtgtaaacttatctaaagatgcgatggaagcagct
caagctgaaatcattaaatcttacggaaaggaatatgctaaaccgagaacttttgttaat
aaaagcaaaggtgcacaggaagctcacgaagcgattcgtcctacggatatgtcgcgccat
acggtaaatatcgaccgagatcaagcacgtttgtatgatttaatttggaaaagaacatta
gcatctcagatggctgatgccgaattggaacgtaccaatgttaaaatagaagccaataat
cattcagaactttttacagcctctggagaagtaattaagtttgaaggatttctaaaagta
tatttagaaggacatgatgatgacgaagaagaacaagaaggaatgttgccttcgatgaaa
gtaaatgaaaaattaataaataattatattactgctaccgaaagatattctcgtgcagca
gcaagatataccgaagcttctttggtaaaaaaattagaagaattaggtatcggtcgtcca
tctacttatgcgccaacaatttctacaattattaatagaaattatgtcgaaaaaggaaat
ttagaaggccaagaaagaaattatacccaactaacacttcaatcgggtaaagtaggagag
aagttgctcaaagaaaatacaggatcagataaaggaaaattagttcccacagatattggt
acaattgtaacagatttcctagtgaagaatttcgataatattcttgattataattttact
gccaaagtagaacaagatttcgacgaaattgcagaaggaaacatgcagtgggcaaaaatg
atgcaggatttttatgataaatttcaccccacagtaaaagatgtcgaagctaatgccgat
agagaatcgggcgaaagaattttaggaatagatccaaaatctggaaaaccagtttctgtc
cgtttgggtaaatttggacccatggcacaaattggcgctgccgatgacgaagaaaaaaca
ttcgcaagtttgttgaaagagcaaaatataggcaacattactttagaagaagtattaaaa
ttatttttacttccaaaaaatcttgggacttataaaggagaagaaatcgaggtttcaaac
gggcgttatggtccttttattcgtttcggaaccacctttgtttccttgccaaaaggagaa
gaaccattaaatgttgatttaaatagagcccaagaattaatagacgaaaagttactagct
gatgcacctattgcagtttataaaggcgaaggcgttcaaaaaggaacaggtcgttttggc
cctttcttaaaatggaatggtattttcatcaatgtcagtacaaaatataattttaacaat
ttgtcgcaacaagatattgaaacgattatcgaagataaaattcaaaaaaacatcgataag
gtaattcataattgggaagctgaaggtattttggttcaaaaagcccgttggggaagatct
gaaattaccaaaggaaaaataaaaattgaactaagtaaagattttgatgctgcaaaatta
accttagcagaagcacaagaaatgattgctaagaagacaccagtaaaaaaggcaccagta
aaaaaagcagtggcaaaaaaacctgctgtgaagaaattagtcgcaaaaaagaactaa
DBGET
integrated database retrieval system
