KEGG   Fusarium pseudograminearum: FPSE_01177Help
Entry
FPSE_01177        CDS       T03456                                 

Definition
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03030  DNA replication
fpu03410  Base excision repair
fpu03420  Nucleotide excision repair
fpu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FPSE_01177
   03410 Base excision repair
    FPSE_01177
   03420 Nucleotide excision repair
    FPSE_01177
   03430 Mismatch repair
    FPSE_01177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpu03032]
    FPSE_01177
   03400 DNA repair and recombination proteins [BR:fpu03400]
    FPSE_01177
Enzymes [BR:fpu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     FPSE_01177
    6.5.1.6  DNA ligase (ATP or NAD+)
     FPSE_01177
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     FPSE_01177
DNA replication proteins [BR:fpu03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    FPSE_01177
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     FPSE_01177
DNA repair and recombination proteins [BR:fpu03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FPSE_01177
   NER (nucleotide excision repair)
    Other NER factors
     FPSE_01177
   MMR (mismatch excision repair)
    Other MMR factors
     FPSE_01177
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-GeneID: 20359797
NCBI-ProteinID: XP_009252572
UniProt: K3VTD4
LinkDB All DBs
Position
3
AA seq 881 aa AA seqDB search
MPSPTKKRKLNNGTKSTAPAKGLEYFFSKQKQNGADSSKKPKLEENDGASSDIPTKMTDE
ELARKLQAEWDQEVANTPHAALQEQTLQLPNKHNVSLSRDESPSPTSTRSKPSITLPTAL
NKPSTNNKAKPTLGLQAAGMAEDTTTTSIPFDESPLTFDPAEYVDQLKEHWASEGGNASY
ALLTRCFILINGTTSRIKIVDTLVNCLRVLIEGDPASLLPAVWLATNAISPPYISMELGL
GGSAISKALRNACGLDNRALKAIYDKHGDAGDVAFEVKKKQSFTLRKPKPLTIKAVYESL
VKIASSQGQGSADTKQRIVDRLLQDARGGEESRFVVRTLCQHLRIGAVKTTMLIALSRAF
LLSRPPGADFPLKSVTDLAKLKKEDLAEVWGRAEEIVKACFARHPNYNDLVPVLLEIGIS
EELLIRCGLSLHVPLRPMLGSITRDLSEMLTKLQGRDFACEFKYDGQRAQIHCDEDGKVS
IFSRHLEVMTDKYPDLVELIPKIRGEGVDSFIMEGEVVAVDRETGELKNFQTLTNRARKD
VDIGAITVDVCMFSFDLMYLNGQPLLDRPFRERRELLRSLFKEIPHHFTWVKSLDATSAD
SESVLEFFKAAIDIKCEGIMVKILDNLPLAPYLGEGEEEGPGGSDRTLTPRSKSKGKGKS
KGKKDETGERVKTRRKPLLATYEPDKRLDSWLKVKKDYNSSFDTLDLIPVAAWHGQGRKA
KWWSPILMACRNEETGSLEAVCKCMSGFTDSFYKANRQFYDDGEDVGEPQNTRTTQPSFV
EYSGPRPDIWFEPQEVWEMAFADITLSPTYTAAIGLVSEERGLSLRFPRFMKKRDDKSLE
EASTNDFLAGLWRKQEAKAASKKENSDGAGAQVEDVEEADD
NT seq 2646 nt NT seq  +upstreamnt  +downstreamnt
atgccgagtcccaccaagaaacggaagctcaacaacggcaccaaatcaacagcgccggct
aaaggtcttgagtatttcttctcaaaacagaaacaaaatggagcggattctagcaagaag
ccaaagctagaagaaaatgatggcgcatcaagtgatattccgacgaaaatgactgatgag
gaattggccaggaaactccaggcggaatgggatcaagaggttgccaacactcctcacgcg
gcgctccaggagcagactctgcaacttccgaataagcacaatgtgtcactatcccgagat
gaaagcccaagtccaacatcgaccaggtccaaaccgtcaatcactctcccaacggctttg
aacaagcctagtacaaacaacaaggcgaaacccacacttggccttcaagctgcgggcatg
gctgaggacacaacaacgacttcgatacccttcgatgagtcgcctctaacattcgatcca
gcagagtatgtggatcagttaaaggaacattgggcctctgaaggtggcaatgcatcttat
gcattgctcactcgctgctttatcctcatcaatggcacaacaagtcgaatcaaaatcgta
gacacacttgtaaactgtttaagagttcttatcgagggtgacccggcaagtctattgcca
gcagtctggctagcaaccaatgccatctcacctccctatatctctatggaattgggattg
ggtggttcggcgatatccaaagcgttgaggaacgcctgcgggctcgataaccgggctcta
aaagccatttatgacaaacacggcgatgctggagacgtagccttcgaagtcaagaagaaa
caaagcttcactcttaggaaaccgaaacctctcacaattaaggctgtttacgagtctttg
gtaaaaattgctagcagtcaaggacagggcagtgcagataccaagcaaagaatagtcgat
cgtcttctccaagacgcccgtggtggagaagaaagccgattcgttgtgcgaaccctttgt
caacatctacgcattggtgctgtcaagacgacaatgctgatcgccttatcacgagccttc
ttactctcgcgtccaccaggggccgattttcctctaaagtcggtaacagatctggccaaa
ctcaagaaagaagatctggctgaagtttggggtcgggctgaggaaatagtcaaggcctgc
tttgcgagacacccaaactataacgatcttgtcccagttcttcttgagattggcatttcc
gaggaactgctaatacgatgcggcctttctctccatgttcctctacgtccaatgcttgga
agcattacgagagatctatccgagatgctcacaaaattacagggaagagactttgcatgc
gaattcaaatacgacggccagagagctcagatacactgtgacgaggatgggaaggtcagc
atcttttctcggcatttggaagtcatgacagacaaataccccgacttggttgagctgata
ccaaagatacgcggagagggtgttgacagtttcatcatggaaggtgaagttgtggctgtt
gaccgtgaaactggagagctcaaaaatttccagacactcacaaatagagcgagaaaagac
gttgacatcggagctattacggtagatgtctgcatgttctcgttcgatttgatgtatctg
aacggccagccattgctagatcgaccatttcgagagaggcgggagcttctacgatcgcta
ttcaaggagataccgcaccattttacatgggtgaagagccttgatgctacgtctgcagac
tcagagtcagtcctcgagtttttcaaagctgcaatagatatcaaatgcgaagggatcatg
gtaaaaatcctggacaacttacctttggcgccatacttaggagagggagaagaagaggga
ccaggaggatctgatagaacattgacaccgagatcaaagtcaaaaggaaaaggaaagtcg
aaaggcaaaaaagatgaaactggagaaagagtcaaaacaagacgcaagcccttattggcg
acgtatgagccagataagcgacttgattcctggctcaaggtcaagaaagactacaactca
agtttcgacacacttgatctcatacctgtcgctgcctggcatggacaaggacgcaaggcg
aaatggtggtcgcccatacttatggcttgccgtaacgaggagacagggtcattggaagcc
gtgtgcaagtgcatgtctgggttcacagatagcttctacaaggccaaccggcagttctat
gacgatggcgaagatgttggtgagcctcagaacacgagaactacccaacccagttttgtg
gaatactcaggcccaagacctgatatttggttcgagccgcaagaagtgtgggaaatggca
tttgcggatattacgcttagtccaacttacactgctgcgatcggacttgtgagtgaagag
agaggtttgagtttgaggtttccaagatttatgaagaagagggatgataaaagtcttgaa
gaggcgagcacaaacgactttttggctggtctttggcgcaagcaagaagcaaaggctgct
tcgaagaaggagaacagcgacggagcaggggcacaggtagaagacgtagaagaagccgat
gattag

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