Fusarium pseudograminearum: FPSE_12056 Help Entry FPSE_12056        CDS       T03456                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism fpu  Fusarium pseudograminearum Pathway fpu03020   RNA polymerase fpu03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:fpu00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     FPSE_12056   09124 Replication and repair    03420 Nucleotide excision repair     FPSE_12056  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:fpu03021]     FPSE_12056    03400 DNA repair and recombination proteins [BR:fpu03400]     FPSE_12056 Enzymes [BR:fpu01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      FPSE_12056 Transcription machinery [BR:fpu03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      FPSE_12056 DNA repair and recombination proteins [BR:fpu03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       FPSE_12056 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R MafB Motif Other DBs NCBI-GeneID:  20370673 NCBI-ProteinID:  XP_009263448 UniProt:  K3V4M6 LinkDB All DBs Position 1:2894200..2899582 Genome browser AA seq 1758 aa AA seqDB search MANLYFTHSSAPLKTVEEIQFGLMSPEEIKNMSVCHIVYPETMDENKTKPRDGGLNDLLL GSIDRSFRCKTCTQAMGECPGHFGHIELAKPVYHPGFIKKVKKILEIVCHNCSKVLADSR DPEFAAAINTRDPKVRFHRVWEACKKKKRCENDEPKQKDDEFAATLKTGPMEGHGGCGNV QPAVRQGALQLKAAFEVTVDEDGQKTKKKETIPITPETAHGILRRISEEDLVNMGLNSDY ARPEWMVLTVLPVPPPPVRPSISMDGTGTGMRNEDDLTYKLGDIIRANGNVKQAIREGSP QHIARDFEELLQYHVATYMDNDIAGQPRALQKSGRPVKAIRARLKGKEGRLRGNLMGKRV DFSARTVITGDANLSLHEVGVPRSIARTLTYPETVTPYNIEKLHQLVENGPNEHPGAQYV VRPDGSRIDLRHHRRAGAISLEYGWKVERHLMTGDYIIFNRQPSLHKESMMGHRVRVMPY STFRLNLSVTSPYNADFDGDEMNLHVPQSEETRAEVKELCLVPLNIVSPQKNGPLMGIVQ DSLAGAYKMCRRDVFLTKEQIMNCMLWVPNWDGVIPQPAIYKPRPRWTGKQLISMVIPKE VSIFNGTDSGESAPLKDEGLLIQAGQLMYGLLTKKSVGASAGGIVHISYNELGPEGAMAF LNGVQQVVTYWLLQNGHSIGIGDTIPDAVTIAKVQAHIDDEKAEVARLTAMATANELEAL PGMNVRATFENKVSMALNQARDKAGTTTQKSLKDSNNAVTMASSGSKGSSINISQMTALV GQQIVEGKRIPFGFKYRTLPHFTKDDYSPEARGFVENSYLRGLTPSEFFFHAMAGREGLI DTAVKTAETGYIQRRLVKALEDLSARYDGTVRNSLGDIVQFLYGEDGLDAMIIENQKLGI LNMSNTAFEKKYRLDLANPPEWFKHDYEFGNELTGDRPSMALLDEEWERLVHDRTRIRAI NRAKGNEEMMQLPLNITRIIESAKRVFNVKANDRSNLRPSDVIPAVQNMLDNMKIVRGTD PISLEADANASILFKGLLRSRLAFKEVVKEHRLNRLAFDHILGELQNRWDRAFVNPGEMV GVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNLAKNIKTPSMAVYLNTPL AKQEQAKKLRSMVEYTNLRSVTSVTEIYYDPNVTETNIPEDLDMVESYYMIPDESVDPTA NQSRWLLRITLDRQKLLDKEIKIDDVAQRIKEEYPTDLAVIFSDNNADEQVIRIRTIHTG DKDDDGDGGRMEDDVMLKRLEAHLLDTLTLRGVPGIERAFLTKGTKLTEDEDGALLAIKD DPRCTQWYLDTSGTALRDVLAVDGVDATRTYTNDLYQIVEVFGIEAARSALAKELTNVLA FDGSYVNHRHIALLVDVMTYRGVISAVTRHGINRADTGALMRCSFEETVEILLEAAATGE LDDCRGISENVMLGQMAPMGTGNFDVLLDPKMLETVISDNSRMGLMAGMPTKSGDIEGAA TPYDTGSPMADSGYLSMSSPAAGNFSPIQGAGSDTPAGFDTVYGGGSVGFGGTAPMSPYN RGAASPFSSTSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPTS PMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPN VHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSPRT PGPGTSGNQYSPNSPSND NT seq 5277 nt NT seq  +upstreamnt  +downstreamnt atggctaacctttacttcacccactcgagcgctccgctcaagacagtggaagagattcaa ttcggtttgatgtcccctgaagagatcaagaatatgagtgtctgtcacatcgtttacccc gaaaccatggacgagaataagacaaaacctcgtgatggtggtctcaacgatctgcttctt ggttcgatcgacagatcgttccgatgcaagacctgcacacaagccatgggcgagtgtccc ggtcactttggccacatcgagctggccaagcctgtctaccatcctggatttatcaagaaa gtcaagaagatcctggagattgtttgccacaattgtagcaaagtgctagccgactctaga gatcccgagttcgctgcagccatcaacactcgagatcctaaagttcgattccaccgagtc tgggaagcttgcaagaagaagaagcgatgtgaaaacgacgagccgaaacaaaaagacgac gaatttgctgcgacgctcaagactggccccatggaaggccatggcggctgtggtaacgtt caacccgctgttcgacaaggtgctctgcaactcaaggccgctttcgaagttactgttgac gaggatggccaaaagacgaagaagaaggagacgatacccatcacacccgagaccgcccac ggcattttgagaaggatttccgaggaagatctagttaacatgggtctcaactcagactac gctcgtcccgaatggatggttcttaccgtccttcctgtaccaccacctcctgtccgtcct agtatttctatggacggcactggaactggtatgcgcaacgaagatgatttgacctacaag ctgggtgatatcattcgcgccaacggaaacgtgaagcaggccattcgcgagggatcgccc cagcacattgctagagactttgaagagctgctgcaatatcacgttgccacgtatatggat aacgatattgctggccaacctcgtgccctgcaaaagagcggtcgacctgtcaaggctatt cgagcccgtctaaagggtaaggaaggtcgtctcagaggtaacttgatgggtaagcgtgtc gatttctctgcacgtaccgtcattactggtgatgccaacctttccctccacgaggtcggt gtgcctcgaagtatcgccagaacccttacttatcccgagactgtaactccttacaacatc gagaagctgcaccaacttgtcgagaacggacccaacgaacaccccggtgcccagtacgtt gtccgacctgacggttctcgaattgacttgcgacatcaccgacgtgctggagcgatctca ctggagtatggatggaaggtagagcgtcatctgatgactggtgattatatcatcttcaat cgtcagccgtctctgcacaaggagtctatgatgggtcatcgtgtccgtgttatgccttac tccaccttccgtctcaacctgtctgtcacttctccttacaacgccgatttcgacggtgac gagatgaatcttcacgtcccgcagagtgaagagacacgtgctgaggtcaaggagctttgt ctagtccctctcaacattgtatctccccagaagaacggccccctcatgggtattgtccag gactctctcgctggagcatacaagatgtgccgtcgagatgttttcctcaccaaggagcag atcatgaactgcatgctttgggtccctaactgggatggtgtcattccccagccagctatt tacaagccccgccctcgctggactggcaagcagctcatcagcatggttatccctaaggag gttagcattttcaacggtaccgactctggcgaaagcgcccctcttaaggacgagggtctc ttgattcaggccggtcaattgatgtatggtcttcttacaaagaagagtgttggtgcttct gccggcggtattgtgcatatcagctacaatgagttgggacctgagggtgccatggctttc ctgaacggagtgcagcaggttgtcacatactggcttctacagaacggtcacagtattggt atcggtgacacgattcccgatgcggtgaccatcgccaaggttcaggcgcacattgacgat gagaaggccgaggtcgctcgcttgacggcgatggctactgccaacgagcttgaggctctt cctggtatgaacgttcgagcgactttcgaaaacaaggtctctatggctctcaaccaggcc cgtgacaaggctggtaccacaacacagaagagtttgaaggattcgaacaatgctgtcacc atggcttcttcaggttccaagggttcttctatcaacatttcacaaatgactgcgcttgtc ggtcagcaaatcgttgaaggaaagcgtattccctttggtttcaagtatcgtactctgcct catttcaccaaggatgattattctcccgaagcccgtggtttcgtcgagaactcttaccta cgtggtcttacccctagcgaatttttcttccacgccatggctggtcgagaaggtctcatt gatactgcggtcaagactgctgaaactggttacattcagcgacgattggtcaaggctctt gaagacctttctgcgcgctacgatggtactgttcgtaattccctgggcgacattgttcaa ttcctttatggcgaagacggtctcgatgctatgatcattgagaatcagaagctgggaatt ctcaacatgtcgaataccgctttcgagaagaagtaccgcctcgatctcgccaaccctcct gagtggttcaagcatgattatgaattcggtaacgagttgactggtgacaggccttctatg gccctccttgatgaggaatgggagagattggtgcatgatcgcactcggatccgagcaatc aaccgtgcgaagggcaatgaggaaatgatgcagctcccattgaacatcactcgcattatt gagtcagcgaagcgcgtctttaatgtcaaagccaacgaccgaagtaacttgcgaccttcc gacgtcatcccagcagtgcaaaacatgctggacaacatgaagatagtccgcggaaccgac ccaatctcattggaggctgacgcgaacgcctccattctcttcaagggactgttgcgttct cgacttgctttcaaggaagtcgtcaaggagcaccgactaaacagactggctttcgaccat attctgggcgaacttcaaaacagatgggaccgtgctttcgtcaaccccggtgaaatggtt ggtgttttggctgcccagtccattggtgagcctgccactcagatgacactgaacaccttc catttcgctggtgtgtcttccaagaacgtcaccctgggtgtgcctcgtctcaaagaaatt ctcaacttggccaagaacatcaagactcctagcatggccgtgtacctaaacacacctctt gccaagcaagagcaagccaagaagctgcgaagtatggtcgaatacaccaaccttcgctct gtcacttcagtcactgaaatctactatgaccccaacgttaccgagacaaacattcctgag gatttggacatggtcgaatcttactacatgattcctgatgaaagcgttgatcccactgcc aaccagtcgcgatggcttctacgtatcaccctcgatcgacagaagcttctcgacaaggag atcaagattgatgacgttgctcagcgcatcaaggaggagtatcccactgatctggcggtc atcttcagtgacaacaacgctgatgagcaagtcattcgcatccgaaccattcacactggt gataaggatgatgatggcgacggtggccgaatggaagacgatgttatgctaaagcgcttg gaagcccatcttttggacacgcttactctccgtggtgtccctggcatcgaacgtgctttc ttgaccaagggaaccaagcttaccgaagatgaagacggagcgttgcttgccattaaggac gaccctcgctgcacacaatggtatttggataccagtggtactgctctccgtgatgtgttg gctgtggatggtgttgacgcgactcgaacatacaccaacgatctttaccagattgttgag gtgtttggtattgaggctgctcgttcggccctggcaaaggagttgacaaacgtgttggcc tttgatggttcttacgtgaaccatcgtcatattgctctccttgtagacgtgatgacctat aggggtgtcatctctgctgtcacacgacacggaatcaaccgagctgatactggtgctctg atgcgttgttcgttcgaggaaaccgtcgagattctgcttgaagctgcggcgacaggtgaa ttggatgactgccgtggtatctctgaaaacgtcatgcttggacagatggcgccaatgggt actggtaactttgacgttcttctggatcctaagatgctcgagactgtcatctcggacaac tctcgcatgggcttgatggcaggcatgcctacaaagagtggggatatcgagggagctgct actccttacgacacgggttctcccatggcggattcgggttacctgagcatgagctctcct gctgctggaaacttctctcctatccagggagccggatcggacacgcctgctggcttcgat accgtatatggtggtggtagcgttggctttggcggtaccgctcccatgagcccgtacaac cgtggagcggccagtccctttagcagtacttcgccgacgtcaccattcagttactcaccc acgtcgcccaacatgggatactcgcccacttcacctcttatcgatggcggtggcatgggc cgatatggaccgacctcgccatctttcagcccatcgtcgccatcattctcgcctacctcg cccatgttgcggcctaccagcccagccagcccgagctacagcccgacgtcaccaagctac tcgcctacttcaccgtcgtctccccgacactactcgcctacatcacctgcgcagttcaac tctcccacttctcccagctactccccggcaagccccaactacagcccgacgtcgcccaac gtgcatggtgctggcggcccaacctcgccatcttactccccagcatctccctcctggtcg ccgacatctcctgaagcttactcgccaacgagtccaaccttccagagaagtcctacgact cagcagtcgcctaccagtccaagttactcgcctacatcgcctgctttctctccccgcacg ccaggcccgggaacgtctggaaaccaatactctcctaactcgccctcaaacgattaa

DBGET integrated database retrieval system