KEGG   Frankia casuarinae: Francci3_1040
Entry
Francci3_1040     CDS       T00320                                 
Name
(GenBank) Exonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
fra  Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:fra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fra03019]
    Francci3_1040
   03009 Ribosome biogenesis [BR:fra03009]
    Francci3_1040
Messenger RNA biogenesis [BR:fra03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Francci3_1040
Ribosome biogenesis [BR:fra03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    Francci3_1040
SSDB
Motif
Pfam: RNase_T DUF3376 Rv2179c-like
Other DBs
NCBI-ProteinID: ABD10422
RhizoBase: Francci3_1040
UniProt: Q2JE70
LinkDB
Position
complement(1236185..1236937)
AA seq 250 aa
MTTATADHSVSGMDRLVWIDCEMTGLDAASDLLLEVACLVTDSELNILDEGIGLVISAPE
EALQTMEPVVREMHEASGLTAAVRASTLSLDDAERQLLDYVRTRIPEVRKAPLCGNSIAT
DRTFLARYLPSLDAHLHYRMIDVSSIKELARRWYVRAYYAAPVKRGGHRALADIQESIEE
LRYYRRAVFVPQPGPGTEQARAIAAEIRDQADASLASLTAGGSEHPQPDDPAGSPARLDG
RPSTARLNGQ
NT seq 753 nt   +upstreamnt  +downstreamnt
gtgacgacggcgaccgcagaccatagtgtcagcgggatggatcgactagtgtggatcgac
tgcgagatgaccggcctggacgccgcgtcggatctactcctggaagtggcctgcttggtc
acggacagtgagctcaacatcctcgacgagggcatcggcctggtcatctcggcgccggag
gaggcgctgcagaccatggagccggtcgtccgcgagatgcacgaggcctcgggcctgacc
gccgccgtccgggcgtccaccttgtccctcgacgacgcggagcgccagctcctcgactac
gtccgcacccggattcccgaggtgcgcaaggccccgttgtgcggcaactcgatcgccacg
gaccgcaccttcctcgcacgctatctgccgtcgctggacgctcacctgcactaccgcatg
atcgacgtttcgtcgatcaaggagctcgcccgccgctggtacgtgcgggcctactacgcg
gctccggtcaaacgcggcggccaccgggccctggcggacatccaggagagcatcgaggag
ctgcgctactaccgacgggccgtgttcgttccccagccggggccgggcaccgagcaggcc
cgcgcgatcgccgccgagatccgcgaccaggccgatgcgtcgctggcctccctgaccgcc
ggaggctccgagcacccgcaaccggacgacccggccggttcacccgcgcggctggacggg
agaccttccaccgcccgcctgaacgggcagtga

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