Frankia casuarinae: Francci3_3609
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Entry
Francci3_3609 CDS
T00320
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
fra
Frankia casuarinae
Pathway
fra00470
D-Amino acid metabolism
fra00550
Peptidoglycan biosynthesis
fra01100
Metabolic pathways
fra01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Francci3_3609
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Francci3_3609
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Francci3_3609
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fra01011
]
Francci3_3609
Enzymes [BR:
fra01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Francci3_3609
Peptidoglycan biosynthesis and degradation proteins [BR:
fra01011
]
Precursor biosynthesis
Amino acid ligase
Francci3_3609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ABD12961
RhizoBase:
Francci3_3609
UniProt:
Q2J6Y1
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All DBs
Position
4310248..4311399
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AA seq
383 aa
AA seq
DB search
MAGSRRRIRLALLFGGRSTEHAISCISASGVLRALDRDVYDVVPVGIDTHGRWVVLPDDP
TALAVTGDRLPAVVAAHGESVVLAADPTTPGLLPCRPRGGLDSVRNTLGSSDALGSSDIP
GDIDVVFPLLHGPFGEDGTVQGLLEMAGLPYVGSGVFASAAAMDKQHMKALLRAAGLPVG
SYAVLRAGDTLTGADQERLGLPVFVKPARGGSSIGISRVEAWADLDTAIKAARASDPKVL
VESAIVGREIECGVLGILDGPGAEASVPAEITVTSSAGFYDFEAKYMSDATHFDVPANLS
HAVREEVRGAAIAAFEALDCAGLARVDMFVTADDHVIINEVNTMPGFTPTSMFPRMWEAS
GVTYPQLVDRLVRLALRDGAGLR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctccaggcgtcggattcggctcgccctcctgttcggtggccgcagcaccgag
cacgcgatctcctgtatatcggccagcggtgtactgcgagccctggatcgtgacgtctac
gacgtcgtccccgtcggcatcgacacacatggccgctgggtcgtgctgccggacgacccg
accgccctcgcggtgacgggagaccgactgcccgccgtcgtcgcggcccacggtgagagc
gtcgtcctggccgcggatccgacgacgcccggtctgttgccgtgccgcccccgcggcggc
ctcgactctgtcaggaacaccctcgggagcagcgacgctctcgggagcagcgacattccc
ggggacatcgatgtggtcttcccgctgctccacggcccctttggggaggatgggacggtc
cagggtctcctggagatggccggcctgccctacgtcggctccggggtgttcgccagcgcg
gccgccatggacaagcaacacatgaaggcactgctgcgggccgccggccttcccgtcggc
tcctacgccgtcctgcgagccggtgacacactcaccggggccgaccaggaacggctgggg
ctgcccgtcttcgtgaagcccgcgcgcggcgggtcgagtatcgggatcagccgggtcgag
gcctgggcggacctggacaccgcgatcaaggcagcccgcgccagcgaccccaaggtcctg
gtggagtcggcgatcgtcggccgcgagatcgagtgcggggtcctcggaattctagacggc
cccggtgccgaggcgagtgtgcccgccgagatcaccgtcacgtcttcggccggcttctac
gacttcgaggccaagtacatgtccgacgccacccacttcgacgtcccggccaacctgtcc
cacgcggtacgggaggaggtccggggagcggcgatcgcggcgttcgaggccctggactgc
gccgggctcgcgcgggttgacatgtttgtcacggccgacgaccatgtgatcatcaacgag
gtcaacacgatgcccggtttcacccctacctcgatgttcccgcggatgtgggaggcgagc
ggggtcacctatccgcagttggtggaccggctcgtcaggctggccctgcgcgacggagcg
gggctgcgctga
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