Frankia sp. EAN1pec: Franean1_0461
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Entry
Franean1_0461 CDS
T00608
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fre
Frankia sp. EAN1pec
Pathway
fre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Franean1_0461
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_0461
Transporters [BR:
fre02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Franean1_0461
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
FeS_assembly_P
DUF3583
Motif
Other DBs
NCBI-ProteinID:
ABW09924
RhizoBase:
Franean1_0461
UniProt:
A8LGI5
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All DBs
Position
complement(544538..546100)
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AA seq
520 aa
AA seq
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MRKRRFLTPAVAGLVTLVLAACGGGSGSSPSTPATGEPIPGGKATVLMLSDPTTLDPARL
GNAYAITPVLGNALYGTLLTDDKKTGEIQYSLIESFETTDQGATFTLKLRPDLVFSDSTP
FDAEAVKFNWDRMRDPATGSTSIAEASMIKAIKVVDDVVLEVTMATPVPSYAYSILTSSM
NWVASPTALRKGAEAFNENPIGAGPFTLQRWNRQATIELIKNPRYWDAPKPYLDGLTLRA
ATDSGQRLNTVVSGGADVAVDSNWLNIAKAREQGLTVDLQELNGGILIALNMRRAPFDDI
RARRAVSAALDLDALNLAVYSGEGKMVDTLFTKGSLFYSDTPLRKHDKETAQRLFDELAA
DGKPVSFTFSAYPTTENRTTAENIQAQLGAFRNVKVEIATVDFSQLAKVRSQHDFDMIVS
GGFFRDPEPGLWTAFHSSSVANQTGVDDPTLNEALLAGRTEITQEAREKAYATVQQQLTD
LVPVIYLARVAPSAIANTNVGGVIQYGNGSLRPEELWIKK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaagagacgtttcctcacccccgccgtcgccggcctggtgaccctggtcttggcc
gcctgtggtggcggctccggctcctccccgtccacccccgccaccggtgaaccgataccg
ggaggcaaggcaacggtgctcatgttaagcgacccgaccactctggacccggcccgtctc
ggcaatgcctatgcgatcactcctgtcctggggaatgccctgtacgggacgttactgacc
gacgacaagaagaccggcgagatccagtactcgctgatcgagtcattcgagacaaccgac
cagggcgccacattcaccctcaagctgcgtccggacctggtgttctctgatagcaccccc
ttcgacgccgaggccgtcaagttcaactgggacaggatgagagaccctgccaccggttcg
acctccatcgcggaggcatcgatgattaaggccatcaaggtggtggacgacgtcgttctt
gaggtcaccatggccaccccggtacccagctacgcctattcgatcttgaccagctccatg
aactgggtcgcctcacccacggccctacgcaagggggcggaggccttcaacgagaacccg
atcggcgccggaccgttcaccctgcagcgttggaacaggcaggccaccatcgaactgatc
aagaatccccgctactgggacgcccccaagccctacctcgacgggctcacgctgcgcgcg
gccaccgactccggccaacggctcaacaccgtggtctccggtggcgcggacgtggccgtc
gactcgaactggctcaacatcgccaaggcccgggagcagggcctgaccgtcgacctgcag
gaactcaacggcggcatcctcatcgccctgaacatgcgccgagcccccttcgacgacatc
cgcgctcgccgcgccgtctccgccgccctcgacctcgatgcactcaacctcgccgtctac
agcggcgaggggaagatggtcgacaccctgttcaccaagggctcgttattctattccgac
actcccctgcgcaagcacgacaaggaaaccgcgcaacggctcttcgacgagctggccgcg
gacggtaagccggtgtcattcaccttttccgcctaccccaccaccgagaaccggacgacg
gccgagaacatccaggcccagctcggcgccttccggaacgtcaaggtcgaaatcgcgacc
gtcgatttctcccagctcgccaaagtgcggtcgcagcacgacttcgacatgatcgtctcc
ggcgggttcttccgtgatcccgagcccgggctgtggacggcgttccacagcagctcggtg
gccaaccagaccggcgtcgacgatccgacgctcaatgaggcgctgctggccggacggacg
gagatcacccaggaggcccgcgagaaggcctacgccaccgtccagcagcagctaaccgat
ctggtcccggtgatctacctcgcgcgggtggcacccagcgcgattgcgaacacgaacgtc
ggcggtgtcatccaatacggcaacggttccctgcgaccagaggagctgtggatcaagaag
tag
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