Frankia sp. EAN1pec: Franean1_3476
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Entry
Franean1_3476 CDS
T00608
Name
(GenBank) ABC transporter related
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
fre
Frankia sp. EAN1pec
Pathway
fre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Franean1_3476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_3476
Transporters [BR:
fre02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Franean1_3476
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
SMC_N
AAA_22
AAA_29
nSTAND1
RsgA_GTPase
nSTAND3
NACHT
ATP-synt_ab
Mg_chelatase
AAA_25
TsaE
AAA_33
TIP49
Motif
Other DBs
NCBI-ProteinID:
ABW12878
RhizoBase:
Franean1_3476
UniProt:
A8KXU4
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Position
complement(4132940..4134724)
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AA seq
594 aa
AA seq
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MTAITGADDAPELLSPPAAAPESPPESPQPPEPTALVEVDGLDVRFGSGPGAVHAVRDVS
LTLTAGRCLALVGESGSGKSALARALLGLAGPTATVTARRLRIDDADALTFRPRDWLKVR
GRRIGLVSQDALVALDPLRPIGREVAEPILAHRLLPRREVEPAVHALLERVGIPDPAERA
RSYVHQLSGGLRQRALIASALAAGPGALIADEPTTALDASVQARVLGLLGQLKADGTGLL
LISHDLAVVEALADEVAVMREGVVVEAGPAAEVLARPRHPYTIALLDAVPGRRGRPNGVA
PATDTAATADATSTADAAGAGDVPGADEAAPLLAVAGATKHFRGPRGSRRTAVDDVSFTL
RAGETLGLVGESGSGKSTLAGLVLGLVAADGGEIRLAGQPWSGMPERERRERRHLLQLVP
QDPLSAFDPRWTVARIIGEGLEAAGVERRERRAQALTLLEQVGLSDIHLDRRPLALSGGQ
RQRVAIARALATRPRLLVCDEPVSALDVSVQAQVLALFRELSDSLGLATLFISHDLAVVR
EVCARVLVMKDGRIVETGPVEQVFADPRHRYTQELLSAVPGKAGRAYRARFGTG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacggccatcaccggagccgacgacgctcccgaactgctctcgcccccggcggcggcg
ccggagtccccgccggagtccccgcagccgccggagccgaccgcgctggtcgaggtggac
ggcctcgacgtgcggttcggctccggccccggcgcggtgcacgccgtacgcgacgtctcg
ctcaccctgaccgcgggccgctgtctggccctcgtcggggagtccgggtccggcaagagc
gcgctggcccgcgcgctgctgggcctggccgggccgacggccaccgtcaccgcccgccgg
ctgcgcatcgacgacgcggacgccctcaccttccggccgcgggactggctgaaggtccgc
ggccggcgcatcggactggtgtcccaggacgcgctggtcgcgctcgacccgctccgcccg
atcggccgcgaggtcgccgagccgatcctggcgcaccggctgctcccccggcgagaggtc
gaaccggccgtgcacgcgctgctggagcgggtcggcatccccgacccggccgagcgggcg
cgcagctacgtccaccagctctccggcgggctgcgccagcgggcgctgatcgcctccgcg
ctggccgccggacccggcgcgctcatcgcggacgagccgaccaccgcgctcgacgcctcg
gtgcaggcccgcgtcctcggcctgctcgggcagctcaaggcggacggcaccgggctgctg
ctgatcagtcatgacctggcggtcgtcgaggcgctggccgacgaggtcgcggtgatgcgc
gagggggtcgtcgtcgaggccgggccggccgccgaggtcctggcccgcccgcggcatccc
tacacgatcgcgctgctggacgccgtccccggccgccgcggacgtccgaacggcgtcgcc
ccggcgaccgacaccgccgcgaccgccgacgcgacctcgaccgccgacgcagcgggggcg
ggcgacgtcccgggcgccgacgaggcggcgccgctgctcgcggtcgccggtgccaccaag
cacttccgcgggccgcggggcagccggcgcacggccgtcgacgacgtctcgttcaccctg
cgggccggcgagacgctcgggctggtgggcgagtcgggctccgggaagtccaccctggcc
ggcctggtgctcggcctcgtcgccgccgacggcggcgagatccggctggccgggcagccg
tggagcggcatgcccgagcgggagcggcgggaacggcgccacctgctccagctcgtcccg
caggatccactgagcgccttcgacccgcgctggacggtcgcccgcatcatcggcgagggg
ctggaggcggccggggtggagcgccgggagcgacgcgcgcaggccctgaccctgctcgaa
caggtcgggctgtccgacatccacctggaccgccgcccgctggcgctgtccggggggcag
cggcagcgggtggcgatcgcccgcgcgctggcgacccggccgcggctgctcgtgtgcgac
gagcccgtctccgccctcgacgtctcggtgcaggctcaggtgctggccctgttccgggag
ctgagcgactccctcgggctggccaccctgttcatctcgcacgacctggccgtggtgcgg
gaggtctgcgcccgggtgctggtgatgaaggacggccggatcgtcgagaccggaccggtg
gagcaggtgttcgccgacccgcggcaccggtacacccaggagctgctctccgccgtcccc
ggcaaggcggggcgggcctaccgcgcgcgtttcggaaccggctga
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