Pseudofrankia inefficax: FraEuI1c_0693
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Entry
FraEuI1c_0693 CDS
T01354
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FraEuI1c_0693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_0693
Enzymes [BR:
fri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FraEuI1c_0693
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FraEuI1c_0693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
ADP78771
UniProt:
E3ITL4
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All DBs
Position
876145..877419
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AA seq
424 aa
AA seq
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MTSTPEEPLPVRTVSRALGDWINRLGRIWVEGQVTEISRRPGMSTAFLTLRDPVADVSLR
LTCPRTVLDAVGPALTDGARVVVWGKPSFHPGRGTLALQVFEIRPVGVGALLARLEALRQ
LLAAEGLFAASRKRRPPFLPGAVGLITGRASAAERDVVENARRRWPAVRIVTREVAVQGP
LAAGQVIDALRELDADREVEVIVIARGGGSLEDLLPFSDEALLRAVAAARTPVVSAIGHE
QDSPLLDYVADVRASTPTDAAKKVVPDVGEQAALVAQLRGRARRVVEHRLDRESRALTDL
RGRPALAAPLRDLDRRSEAVEALTRRAFRCVTHAVDVAGRDVAHAAARLRALSPAATLDR
GYALVQDGSSGAIIRDPVDLTAHQTLQVRVARGSFAATVADPLPSQPPPDAASQLTAPSS
GRPS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacgcccgaagaaccgctgccagtgcggacggtgtcgcgcgcgctcggggac
tggatcaaccggctgggccggatctgggtcgaaggccaggtcacggagatctcccgccgg
cctgggatgagcaccgcgttcctgacgctgcgcgacccggtggcggatgtctcactgcgg
ctcacctgcccccggacggtgctcgacgccgtcgggcccgcgctgacggacggcgcgcgg
gtcgtcgtctggggcaagccgtccttccacccggggcggggcacgttggcccttcaggtc
ttcgagatccgcccggtcggggtcggcgcgctgctcgcccggctggaggcgttgcgtcag
ctgctggccgccgaggggctgttcgccgcgtcccgcaagcgccggccgccgttcctgccc
ggcgcggtcggcctgatcacgggccgggccagcgccgccgagcgggacgtggtcgagaac
gcccgccgccgctggccggcggtccggatcgtcacccgcgaggtcgccgtacaggggccg
ctggcggcgggccaggtcatcgacgcgctgcgcgagctggacgccgaccgggaggtcgag
gtcatcgtgatcgcgcgcggcggcggctcgctggaggacctgctgcccttctccgacgag
gcgctgctgcgggcggtcgccgcggccaggaccccggtggtgtcggcgatcggacacgag
caggacagccccctgctcgactacgtcgccgacgtccgcgcctccacgccgaccgacgcg
gccaagaaggtcgtccccgacgtcggcgagcaggccgcgctggtcgcccagttgcgcggg
cgggcccgccgcgtcgtcgagcaccggctcgaccgcgagagccgggcgctgaccgacctg
cgtggccggcccgcgctggccgccccgctgcgtgatctcgaccgccgctccgaggcggtg
gaggccctgacccggcgcgccttccggtgcgtcacgcacgcggtcgacgtcgccgggcgc
gatgtggcacacgcggccgcccggctgcgggcgctgtcgccggccgcgacgctcgaccgg
ggctacgccctcgtccaggacgggtccagcggggcgatcatccgcgacccggtggacctg
accgcccaccagacgctgcaggtccgcgtcgcgcggggctcgttcgccgcgacggtggcg
gacccgctgccgtcccagccgccgccggacgccgcatcccagttgaccgccccaagctcc
gggagaccctcatga
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