Pseudofrankia inefficax: FraEuI1c_5204
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Entry
FraEuI1c_5204 CDS
T01354
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fri03019
]
FraEuI1c_5204
03009 Ribosome biogenesis [BR:
fri03009
]
FraEuI1c_5204
Messenger RNA biogenesis [BR:
fri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FraEuI1c_5204
Ribosome biogenesis [BR:
fri03009
]
Eukaryotic type
Pre-60S particles
RNases
FraEuI1c_5204
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Paralog
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GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADP83192
UniProt:
E3J6X2
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Position
complement(6402624..6403340)
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AA seq
238 aa
AA seq
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MTLTRGNPSVRQMDRLVWIDCEMTGLDPASDVLLEVACLVTDGELNVVGDGVDLVISAPD
PVLETMVPVVRDMHATSGLTEAVRASTLTVAEAEQQVLAYVRTLVPENRRAPLCGNSIAT
DRTFLARYMPELDSYLHYRMIDVSSVKELARRWYPRAYYAAPAKRGGHRALADIRESIEE
LRYYRRTVFVGAPGPTTDEARAAATEIRAESDAELAAAPSDNGSAPDAAPATAGPTAD
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctgacgcggggaaaccctagtgtcagacagatggaccgcctggtgtggatcgac
tgtgagatgacgggcctcgacccggcctcggacgtgctgctggaggtcgcctgcctggtg
accgacggggagctcaacgtcgtcggcgacggggtcgacctggtcatctccgcgccggac
ccggtccttgagacgatggtgccggtggtcagggacatgcacgcgacctcggggctgacc
gaggcggtccgcgcctcgacactcaccgtcgccgaggccgagcagcaggtgctcgcctac
gtgcgcaccctcgtcccggagaaccggcgggcgccgctgtgcgggaactcgatcgccacc
gaccgcacgttcctcgcccgctacatgcctgagctggacagctacctgcactatcggatg
atcgacgtgtcgtcggtcaaggagctggctcgccgctggtacccgcgtgcctactacgcc
gcccccgccaagcgtggcggccaccgtgccctcgccgacatccgcgagagcatcgaggag
ctgcgctactaccgccgcactgtcttcgtcggcgcgcccggtcccacgaccgacgaggcg
cgcgcggcggccaccgagattcgggccgagtccgacgccgagctggcggcggcaccatcg
gacaacggcagcgcccccgacgcggcgcccgcgaccgcgggcccgacggcggactga
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