Pseudofrankia inefficax: FraEuI1c_5993
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Entry
FraEuI1c_5993 CDS
T01354
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00300
Lysine biosynthesis
fri00470
D-Amino acid metabolism
fri01100
Metabolic pathways
fri01110
Biosynthesis of secondary metabolites
fri01120
Microbial metabolism in diverse environments
fri01230
Biosynthesis of amino acids
Module
fri_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FraEuI1c_5993
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FraEuI1c_5993
Enzymes [BR:
fri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FraEuI1c_5993
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADP83977
UniProt:
E3IZQ9
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All DBs
Position
complement(7375548..7376882)
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AA seq
444 aa
AA seq
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MTLGELIPSLRPALRAKLAAGIWPQGTTLDSDGELHVGGSAMTRVAARFGTPAYVLDEAT
FRRRARQYRAALPGVEVCYAGKALLTRAVARWVAQEGLSLDVCSAGELAVARSVHFPADR
LILHGNAKTPEDLKAALDYHVGRIVIDSTDEISHLGPLAHDQRVLLRVTPDVDGHTHHAI
STGVPDQKFGIPLGAATDAAGQVLDQPGLRLVGLHCHIGSQLTRIGAIEEATRRLIGLLA
TIRDQHGIVLAQLNIGGGHAVRYTPGDDGFDLAGLAHRLTGALAYESERHRLPAPRLTVE
PGRALIAQAGITLYRVITVKHLPGVRTFVAVDGGMSDNPRPALYGARYTLQLIGRRSLAA
SHPATVVGRHCEAGDILARDVPLPGDIHAGDLLAVATTGAYHHSLASTYNLVGRPPLVAV
HDGTARLLIRRETEEDLLTRDIGV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctgggtgagctcatcccgagtctgcggcccgcgctgcgggcgaagctcgcggcc
gggatctggccgcagggcaccacgctggacagcgacggtgaactccacgtcgggggcagc
gcgatgacgagggtggccgcgaggttcggcaccccggcctatgtgctcgacgaggcgacg
ttccgtcgccgcgcccggcagtaccgcgcggccctgcccggcgtcgaggtctgctatgcg
ggcaaggcgctgctcacccgggcggtcgcccgttgggtcgcgcaggagggcctgtccctg
gacgtctgctcggccggcgagctcgccgtggcccgatccgtccacttccccgccgaccgg
ctcatcctgcacggcaacgccaagacccccgaggacctcaaggcggccctcgactaccac
gtcgggcgcatagtgatcgactcgaccgacgagatcagccacctcggcccgctggcccac
gaccagcgggtactgctgcgggtgacccccgacgtcgacggccacacccaccacgccatc
agcaccggggtccccgaccagaagttcggcatcccgctgggcgccgccaccgacgccgcc
ggccaggtactggaccagccgggccttcgactggtcgggctgcactgccacatcggctcc
cagctcacccgtatcggcgcgatcgaggaggcgaccagacgcctgatcggcctgctcgcc
accatccgcgaccagcacggcatcgtgctggcgcagctcaacatcggcggcggccacgcc
gtccgctacacccccggcgacgacggcttcgacctcgcgggcctcgcgcaccgcctgacc
ggcgccctggcctacgaaagcgaacgacaccgcctgcccgccccccgcctcaccgtcgaa
cccggccgcgccctgatcgcccaggccggcatcaccctctaccgggtcatcaccgtcaaa
cacctcccaggcgtacggaccttcgtcgccgtcgacggcggcatgagcgacaacccccgg
cccgcgctctacggcgcccgctacaccctccagctcatcggccgccgctccctcgccgcc
tcccaccccgccaccgtcgtcggccgccactgcgaagccggcgacatcctcgcccgcgac
gtcccgctacccggcgacatccacgcaggcgacctgctcgcggtcgccaccaccggcgcc
taccaccacagcctcgcctccacctacaacctggtcgggcgtcccccactcgtcgccgtc
cacgacggcacagcccgcctgctcatccgccgcgagacagaggaagacctcctcacccgc
gacatcggcgtgtga
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