Frigoribacterium sp. NBH87: F1C15_01345
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Entry
F1C15_01345 CDS
T06748
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
frn
Frigoribacterium sp. NBH87
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frn03032
]
F1C15_01345
03400 DNA repair and recombination proteins [BR:
frn03400
]
F1C15_01345
Enzymes [BR:
frn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F1C15_01345
DNA replication proteins [BR:
frn03032
]
Prokaryotic type
DNA Topoisomerases
F1C15_01345
DNA repair and recombination proteins [BR:
frn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1C15_01345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QNE42652
UniProt:
A0A7G6YVY7
LinkDB
All DBs
Position
complement(286582..289095)
Genome browser
AA seq
837 aa
AA seq
DB search
MTTTTNDMSSASDGERIEDIDVSLEMQGSFLEYAYSVIYSRALPDARDGLKPVQRRILYQ
MSEMGLRPDRGHVKSARVVGEVMGKLHPHGDTAIYDAMVRQAQSFTMRVPLIDGHGNFGS
LDDGPAAPRYTEARLAEASLAMTRGLDEDVVDFVPNYDNQLMQPEVLPAAFPNLLVNGAS
GIAVGMATNMAPHNLVEVVGAARHLIDHPGASLDDLMAFVPGPDLPTGGTISGLAGVRDA
YATGRGSFKTRAKVQVESITARKSGLVVTELPYLVGPEKVIEKIKDGVQAKKLTGITDVT
DLTDRTHGLRLVIGIKTGFSPEAVLEQLYRYTPLEDGFSINAVALVEGQPRTLGLKEMLQ
VYVGHRLEVVTRRSRHRLGKKEDRLHLVEGLLVAILDIDEVIQVIRTSDDSAAARARLRE
VFDLSEIQAEYILDLRLGRLTKFSRIELESERDELVAAIEELRALLADPARLRALVSSEL
AEIAEQFGTPRRTLLTEAAPSVATAGRGRKAPVLEIADTPTRVFLSTTGRLLRVDHPEPG
SAAPTPPARRTSHDAVLSSIDTSTRSEVGAVTSTGRLIRFTPVDLPSVPPTSVQLGAGVP
VREYLGLPDATEKVLALVSLTADRPVALGTARGVVKRVAPGQWPAKPEFPVVTLKPGDSV
VGVAQGTDDDEFVFVTSAAQLLRFPAASVRPQGPAGGGVAGVSLPDSARVLFFGAVPEGQ
EAVVATVSTSAASIDGVDPGRAKLSAFDEFPAKGRSTGGVRAHALLKGEGGLSLAWVGPG
PARAVAADGAVRSLPEELVRRDASGAPLPAVVASVGASVAHVTDSATGAEAGAEPVD
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgacgacgaacgacatgagcagcgccagcgacggtgagcggatcgaggacatc
gacgtctccctcgagatgcaggggtcgttcctcgagtacgcgtactccgtgatctactcg
cgggccctgcccgacgcccgcgacggcctcaagccggtccagcgccgcatcctgtaccag
atgtcggagatggggctccgccccgaccgcgggcacgtcaagagcgcccgcgtcgtcggc
gaggtgatgggcaagctgcacccccacggcgacacggcgatctacgacgccatggtgcgc
caggcccagtcgttcaccatgcgcgtgccgctgatcgacggccacggcaacttcggctcc
ctcgacgacggccccgccgccccgcgctacaccgaggcccggctggcggaggcctccctg
gccatgacccggggcctcgacgaggacgtcgtggacttcgtcccgaactacgacaaccag
ctgatgcagcccgaggtgctgcccgcggccttccccaacctgctcgtcaacggcgcgagc
ggcatcgccgtcggcatggcgaccaacatggcgccccacaacctcgtcgaggtcgtcggt
gccgcccggcacctcatcgaccaccccggggccagcctcgacgacctcatggccttcgtg
ccgggccccgacctccccaccggcggcacgatctccgggctcgccggggtgcgcgacgcg
tacgcgaccgggcggggctcgttcaagacgcgggccaaggtccaggtcgagagcatcacc
gcccgcaagtccgggctcgtcgtcacggagctcccctacctcgtcggcccggagaaggtc
atcgagaagatcaaggacggcgtccaggcgaagaagctgacgggcatcaccgacgtcacc
gacctcaccgaccgcacgcacgggctccggctcgtcatcggcatcaagaccgggttcagc
ccggaggcggtgctcgagcagctctaccgctacacgcccctggaggacggcttcagcatc
aacgccgtcgccctggtggagggccagccccggacgctgggcctcaaggagatgctgcag
gtctacgtggggcaccgcctcgaggtcgtcacgcgccgcagccgccaccgcctgggcaag
aaggaggaccgcctccacctggtcgagggcctcctcgtcgccatcctcgacatcgacgag
gtgatccaggtcatccgcacgagcgacgactcggccgccgcacgggcccggctccgggag
gtcttcgacctcagcgagatccaggccgagtacatcctcgacctgcgcctcggccggctc
acgaagttcagccgcatcgagctcgagtcggagcgcgacgagctcgtcgccgccatcgag
gagctccgcgccctcctggccgacccggcccggctgcgcgcgctggtgtcgtccgagctc
gcggagatcgcggagcagttcggcaccccgcgacgcaccctgctcaccgaggccgccccg
agcgtcgcgacggccgggcgtggacgcaaggcgcccgtgctggagatcgcggacacgccc
acgcgggtgttcctctcgacgaccgggcgcctcctcagggtcgaccaccccgagccgggc
tccgcggccccgactcccccggcccgacgcacgagccacgacgcggtgctctcgtcgatc
gacacctccacgcggagcgaggtcggcgccgtgacgtcgaccggtcgcctcatccggttc
acgccggtggacctgccctccgtcccgcccacctcggtccagctcggggccggcgttccg
gtgcgcgagtacctcgggctgccggacgccaccgagaaggtgctggcgctcgtctccctc
accgccgaccgcccggtcgccctcggcacggcacgcggcgtcgtcaagcgggtcgccccc
ggccagtggccggccaagcccgagttcccggtcgtcacgctcaagccgggcgactcggtg
gtcggcgtggcgcagggcaccgacgacgacgagttcgtcttcgtcacgtcggccgcccag
ctgctccggttccccgcagcgtccgtccggccccagggaccggccggcggcggcgtggcc
ggggtcagcctgcccgacagcgcccgcgtcctcttcttcggggccgtgccggaggggcag
gaggcggtggtcgcgacggtgtcgaccagtgcggcctcgatcgacggcgtcgaccccggc
cgcgcgaagctcagcgccttcgacgagttcccggccaagggccgctcgaccggcggcgtc
cgcgcccacgccctcctcaagggggaaggcggcctctcgctcgcctgggtggggccggga
cccgcccgggcggtcgcggcggacggcgccgtgcgctcgctgcccgaggagctcgtgcgg
cgcgacgcctcgggggcaccgctcccggccgtcgtcgcgtcggtgggggcctcggtcgcg
cacgtcaccgactcggccacgggggccgaggccggggccgagccggtcgactga
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