Candidatus Fukatsuia symbiotica: CCS41_01310
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Entry
CCS41_01310 CDS
T06003
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fsm
Candidatus Fukatsuia symbiotica
Pathway
fsm03420
Nucleotide excision repair
fsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCS41_01310
03430 Mismatch repair
CCS41_01310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsm03400
]
CCS41_01310
Enzymes [BR:
fsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCS41_01310
DNA repair and recombination proteins [BR:
fsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCS41_01310
MMR (mismatch excision repair)
Other MMR factors
CCS41_01310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AWK13446
UniProt:
A0A2U8I2V3
LinkDB
All DBs
Position
complement(267025..269187)
Genome browser
AA seq
720 aa
AA seq
DB search
MDDSYLLDSLNEKQREAVAAPLSNRLVLAGAGSGKTRVLVHRVAWLLSKKKVSPFSIIAV
TFTNKAAAEMRYRIEHLLGDGNNNHSIWMGTFHGLAHRLLRIHHLDANLPPDFQVLDSDD
QLRLVKRIVKALNLDDKKWAPRQAMWYINSKKEAGLRPQHIEDYGHLAEATWLSIYHAYH
QACDRGGLVDFAELLLRAHELWLHKPDILNHYQQRFNHILVDEFQDTNSIQYAWIRLLAG
DQANVMIVGDDDQSIYGWRGAQVENIQRFLQDYPAAETIRLEQNYRSTGNILTAANTLIA
NNSERLGKNLWTQAAIGEPIALYAAINEWDEARFVVSRIKVWQERGGLLKNCAILYRNNA
QSRVLEDALLHATMPYRIYGGQRFFERQEIKDALAYLRLVCNRNDDVAFERVVNTPTRGI
GDRTLDILRQHARDQQLTLWQSTTTLLQNNVLAGRVAATLQRFIELVEALAHETANLPLH
KQTDQIIHDSGLWSMYKEEKGEKGQARIENLTELVTATEQYQHEDLDMSPLSAFLSHAAL
EAGEGQADPHQDAVQLMTLHSAKGLEFSQVFIVGVEEGIFPRQISSDTSGHLEEERRLAY
VGITRAMQKLTLTYAESRRFYGKDVKQPPSRFIDELPSICIERVRSRATVSRPFKNYSRD
PSLHKDDNDFTVGQRVRHPIFGEGTIVQLENNDEQKRVQVAFPGEKAKWLVVAYARLETL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcttatctacttgacagtttgaatgaaaaacaacgcgaagccgtggcagct
cctctaagcaacaggttggtactggcaggtgccggtagtggtaaaacccgcgtattggtg
catcgtgtcgcgtggttattatcgaaaaaaaaagtatcgcccttttctattatcgcggtc
actttcaccaataaagcagccgccgagatgcgctaccgtattgagcatttactcggcgat
ggcaacaataaccatagcatttggatgggtactttccacggactggcacatcggctattg
cggatccatcatttggatgccaatctgccgccggatttccaggtgctcgatagtgacgat
cagttacgtttagtcaaacgtatcgtcaaagctcttaatctggatgacaaaaaatgggca
ccacgtcaagccatgtggtacatcaatagcaaaaaagaagccggattacgtccacaacat
attgaagattacggtcacttggcagaagccacctggttgagtatttatcacgcctatcat
caagcctgtgacaggggtggattggtcgattttgcagaactgctgctgcgggcccatgaa
ttatggctgcataaaccagatatcctgaatcattaccaacagcgttttaatcatatttta
gtcgatgagtttcaggatactaacagcattcagtacgcctggatccgcttattggccgga
gatcaggctaatgtgatgatcgtcggtgatgatgatcaatcgatttacggttggcgtggg
gcgcaggttgaaaatattcaacgtttcttacaggactaccctgctgcagaaaccattcga
ttggaacaaaattaccgttccaccggtaatatcctgacggcggctaatacgctgattgcc
aataacagtgaacggctaggcaaaaatctatggacgcaggcagccataggggaacctatt
gctctctatgccgccatcaatgaatgggatgaagcccgtttcgtcgttagtcggatcaaa
gtttggcaagaaagaggaggtttactaaaaaactgtgccattttgtatcgcaacaatgcg
caatcacgggtattggaagatgcacttctacacgccactatgccgtatcgtatttatggc
ggtcagcgtttctttgaacgtcaggaaataaaggatgccttggcttatctgcgcctagtt
tgcaaccgtaatgatgatgttgcttttgaacgggtagtgaatacaccgacgcggggtatt
ggcgatcgcaccttagatatactgcgccaacatgcgcgcgaccaacagttgaccctgtgg
caatccaccacgacactgttacagaataacgtgttggcaggtcgtgtcgccgcgacactc
caacgttttattgaactggtggaagcattggcacatgaaaccgctaatttgccgttacat
aaacaaactgatcaaatcattcacgattccggtctatggtcaatgtacaaagaagaaaaa
ggtgagaaaggtcaagcccggattgaaaaccttacagaactggtaacggcaaccgaacaa
taccaacacgaagatttagacatgtcaccgttgtcagcgtttctttctcatgctgcgtta
gaagcgggtgaaggacaggccgatcctcaccaggatgcggtacaattgatgacacttcat
tccgccaaaggtctagaattttcgcaagtatttattgtcggcgtggaagaaggtatattc
cctcgccaaatatcgtcggatacaagtggacatttggaggaagaacgccgcctcgcctat
gttggcatcacccgtgcgatgcagaaactgacgttaacttatgcggaaagccgtcgtttc
tatggtaaagatgtaaaacagccgccttctcgttttattgatgaactcccgtcaatctgt
atcgagagagttcgatcacgtgctacggtttctcgtccgtttaaaaattattcgagggat
ccttccctacataaagacgataacgattttaccgtaggtcaacgtgtacgccatcccata
tttggtgaaggcacgatagtgcaactagaaaataatgatgaacaaaaacgggtacaagtg
gcctttcctggtgagaaagcaaagtggctggtggtggcctatgcaagattagagacgtta
taa
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