Candidatus Protofrankia datiscae: FsymDg_1448
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Entry
FsymDg_1448 CDS
T01530
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fsy03019
]
FsymDg_1448
03009 Ribosome biogenesis [BR:
fsy03009
]
FsymDg_1448
Messenger RNA biogenesis [BR:
fsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FsymDg_1448
Ribosome biogenesis [BR:
fsy03009
]
Eukaryotic type
Pre-60S particles
RNases
FsymDg_1448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AEH08916
UniProt:
F8B240
LinkDB
All DBs
Position
complement(1694253..1695065)
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AA seq
270 aa
AA seq
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MDRLVWIDCEMTGLDAASDLLLEVACLVTDSELNILGGGVDVVVSAPETALAGMDAVVQQ
MHATSGLTEAVRASTLTVADAERQVLDYVRDQIPDAGKAPLCGNSIATDRNFLARYMPAL
DSYLHYRMVDVSTVKELARRWYPRAYYAAPAKRGGHRALADIQESIDELRYYRKAIFVPQ
PGPTSEFARATAQEITRAAGRETGTDDAGDDAGSPPSASAGAPRTGTTSAETAPTSRTPA
DAAQTPPAAVRARPPSGRARHPPNTATIRK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcctcgtctggatcgactgtgagatgaccgggctcgacgccgcctccgatctc
ctgttggaggtcgcatgcctggtcaccgacagcgaactgaatatccttggcggcggcgtg
gacgtggtcgtgtccgcgccggagaccgcactggccgggatggatgccgtagtccagcag
atgcacgccacctcggggctgaccgaagccgtacgggcatcgacgctgaccgtggccgac
gccgaacgacaggtgctcgactacgtccgcgatcagatcccggacgcgggcaaggcccca
ctgtgcggcaactcgatcgctaccgatcgcaacttcctcgcccggtacatgccggcgctc
gacagctacctgcactaccgaatggtcgacgtgtcgaccgtgaaggaactcgcccgacgc
tggtacccgcgggcctactatgcggcaccggccaagcgtggtgggcatcgcgccctggcc
gacatccaggagagcatcgacgagctgcgctactaccgaaaggcgatcttcgtaccgcag
ccgggacccaccagcgagttcgctcgggcaacggcgcaggagatcacccgggcggcgggc
cgggagaccggcacggacgacgcgggcgacgacgcgggcagcccaccatccgcgtcggcg
ggcgccccccggacgggcaccacctcggcagagaccgcccccaccagccgcaccccggcg
gatgccgcgcagaccccaccggcggccgtccgggcgcggccaccgtccgggcgcgctcgc
catccgccgaacacggccaccatccgaaagtag
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