Candidatus Protofrankia datiscae: FsymDg_1537
Help
Entry
FsymDg_1537 CDS
T01530
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fsy
Candidatus Protofrankia datiscae
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsy03400
]
FsymDg_1537
DNA repair and recombination proteins [BR:
fsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FsymDg_1537
Archaeal homologous recombinant proteins
FsymDg_1537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AEH08997
UniProt:
F8B3Q2
LinkDB
All DBs
Position
complement(1808986..1812675)
Genome browser
AA seq
1229 aa
AA seq
DB search
MRPHRLELAAFGAFPDKIELDFDRLGAGSLVLLCGETGGGKTTLLDALGFALYGVVPGLR
ARAKDLRSHHAGADAQPRVQLEFSVSGQRYQITRTAAWDRPRRGGGGSSRVNPTALLRHR
TDTGWESVAQRNEDVGLEIGRLLGMTAEQFFQVIMLPQGRFADFLQADHDARERLLKRLF
AVSRFEHAEQWLADQAKIAGERLAAARGDLARVATRAAEAAAATEPNDLETDADWVAGLA
AAADAAARTATQHAGAAAEARRQAEESLDLTRGLAERQQQRRELDARLATLEAQLSAIEV
MAAELAAARRAATVRRALDQVRERADDLTRARLAEDAGRHRLELLGARHDVDVDELARLA
RVAHTDMGRLEQFANILTAADADDAAATAADIDADTHAAAVATLTGYLRAELPEQRRTLE
ARHSRARAAATALPGAREQARTAAELAAAVRRRGQALTHAHDAEQSARLAREQAGDIRQQ
RFDAITAELSAALVDGSPCPVCGSLTHPDPAEARADHISKDDELAAEAIANRLATQATDA
RRDADRLDERIRTLTRALANQVEPATAVPGPAGPAAPGQTAPAADLGPAGDRTGAIGTAG
TVGTVGTVGVSTTANTPPTAPAPANPAPANPANNTVSANATTAGATTADTPVVDVTAVGP
AGGTRVESVAPRGPLPSEDVGSGPPRPVRAFATVTVLGVPDPVPGGNDGKTDHRNDRGNA
VDHETTGRENTGRAAAGHADRRTADPRATGHSAAQHGPAQHGPTDRGSDRQVEHTDHQAD
HHADHKVAGHGAADGVTRLEGLPAGPELPTVLPVDAFEQAAVGLADRAETLAAQADDLPA
AERALERVRQEETRAAADLAGHAAGEQLARTRAQECRARAERQRASLPPELRDVGRLAAR
QREVAQFADAYSDCHAAASTTALAEEEYRRAAAGASHDAHAAGFPDVAAAQAACREEGWI
VDTEARLTAHRDDLVGVRSHLASPQLAVDPDRPAPVAEREADALAARQRHEAALTEAARA
DDRARRLSDLVPAFAAAFAAVPPLREAAEELRGLAELATGRGGNRHGMPLSSFVLAARLE
EVATAASGRLSAMSGGRFTLVHDSGERRDRRRRAGLGLLVEDAWTGRRRDTATLSGGETF
QAALSLALGLADVVTAESGGQAMDALFIDEGFGSLDPDSLEEVMNVLDSLRSGGRLVGIV
SHVADLRQRIPTQITVIKQANGSHVRTTV
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgcaccggctggaactcgccgccttcggagccttccccgacaagatcgaactg
gatttcgaccggctcggagccggtagcctagtcctactgtgcggcgagaccggcggcggg
aagaccacactgctcgacgcgctcggcttcgccctctacggagtcgttccggggctgcgg
gcccgcgcgaaggacctgcgctcccaccatgccggcgcggacgctcagccgcgtgtgcaa
ctggagttcagcgtgtccgggcagcgttaccagatcacccggacggccgcctgggacagg
cccaggcgcggcggcgggggcagctcccgagtgaacccgaccgccctgctcaggcaccgg
accgacaccggctgggagtccgtcgcccagcgcaacgaggatgtcgggctcgagatcggc
cggctgctcgggatgaccgccgagcagttcttccaggtgatcatgctaccgcaggggcgc
ttcgccgacttcctgcaggccgaccacgatgcgcgggaacggctgctcaagcggctgttc
gccgtcagccggttcgagcacgccgaacagtggctcgccgaccaggccaagatcgcgggc
gagcggctggccgccgcccgcggcgacctcgcccgggtggcgacccgggccgccgaggcc
gccgcggccaccgaaccgaacgatctcgagaccgacgccgactgggtcgccggccttgcc
gctgccgcggacgccgccgcccgcacggccacgcagcatgccggagcagccgccgaggcc
cgccgacaggccgaggagtcgctcgacctcacccgcgggctcgccgaacgccaacagcag
cggcgtgagctcgacgccaggctggcgacactcgaagcgcagctctcggcgatcgaggtc
atggccgccgagctggccgccgcccgccgtgccgccaccgtccgccgtgccctggaccag
gtacgggagcgggcggacgacctgacccgggcacggctggccgaggacgccggccgccac
cgtctggaactgctcggcgcccggcacgacgtcgacgtcgacgagctggcccggctggcc
cgggtcgcccacaccgacatgggacgcctcgagcagttcgcgaacatcctgaccgccgcc
gacgcggacgacgccgccgccacggcggccgacatcgacgccgacacgcacgcggccgcc
gtcgccaccctcaccggatacctgcgcgccgagctgcccgaacagcgccgtaccctcgag
gccaggcacagccgtgccagggccgccgcaaccgccctgccaggcgcacgcgagcaggca
cggacggccgccgagctggccgccgccgtacgccgacgggggcaggccctcacccatgcg
cacgacgcggagcagtccgcacggctggcccgcgagcaggccggtgacatccgtcagcag
cgcttcgacgcgatcaccgcggagctcagcgccgccctggtcgacggttcgccctgcccg
gtctgcggttccctcacgcatcccgacccggccgaggcccgcgcggaccacatcagcaag
gacgacgagctcgcggccgaagccatcgccaaccggctcgcgacgcaggccaccgacgcc
cgccgcgacgccgaccggctcgacgaacggatccgcacgctgacgcgcgcgctggccaac
caggtggagcccgccaccgccgtccccgggcccgccggcccggccgccccggggcagacc
gcacccgcggccgacctcggcccggccggtgacaggactggcgcgatcggcacagcgggc
acggtgggcacggtgggcacggtgggcgtatcgaccacggcgaacaccccgccaacagct
ccggcgccggcgaacccggcgcctgcgaacccggcgaacaacacggtgtccgcgaacgcg
acaacggcaggtgcgacaacagcggacacgccggtggtggacgtcacggcggtgggtccg
gccggcggtacgcgcgtcgagtccgtcgcaccgcgcggcccgttgccctccgaggatgtc
ggtagcgggcctccccgcccggtcagggcgttcgcgacggtaaccgtcctgggcgtgccc
gaccccgtccccggcgggaacgacgggaaaaccgatcacaggaatgatcgtggcaacgct
gtcgatcacgaaaccaccggtcgcgagaacaccggccgcgcggccgccgggcacgccgac
cgcaggaccgccgaccccagagccaccggccacagcgccgcccagcacggtcccgcccag
cacggtcccaccgatcgcgggagcgaccgccaggtcgagcacaccgatcaccaggctgat
catcatgccgatcacaaggtcgccggccacggtgccgcggacggtgtcacacggctggaa
gggctgcccgcaggccccgaactgcccaccgtgctccccgtcgacgcgttcgagcaggcc
gcggtcggcctggcggaccgggccgagacgctcgccgcgcaggccgacgacctcccggcc
gccgagcgggcgcttgagcgggtgcgtcaggaggagacccgggccgcggccgacctggcc
ggccacgccgccggtgaacagctcgcccgcacccgggcgcaggagtgccgggcccgggcc
gagcggcagcgggccagcctgccaccggagctacgggacgtcgggcggctggccgcccgc
cagcgcgaggtcgcccagttcgccgacgcctactctgactgccacgcggccgcctcaacc
acggccctggccgaggaggagtaccgccgcgccgcggccggcgcgagccacgacgcccac
gccgccggcttcccggacgtggccgcggcccaggcagcctgccgggaggaaggctggatc
gtcgacaccgaggcacgcctgaccgcccaccgcgacgaccttgtcggtgtgcggtcccat
ctggccagcccccagctggccgttgatccggacaggccggcgccggtggccgagcgggag
gcggacgcgctcgcggcccggcagcggcacgaagcggcgctcaccgaagcggcgcgcgcc
gacgaccgggcccggcggctgtccgacctggtgcccgcgttcgccgccgcgttcgccgcg
gtaccgccgctgcgcgaggccgcggaggaactgcgcggcctcgccgaactggccacgggc
cgtggcggcaaccgccacggcatgccgctgtcgagcttcgtcctcgccgcccgtctcgag
gaggtcgcgaccgcggcgagcggacgcctgtcggcgatgagcggcggccggttcaccctc
gtccacgacagcggtgagcggcgggaccggcgccggcgggccggcctcggcctgctggtc
gaggacgcctggacgggtcggcggcgcgacaccgccacgctgtccggcggggagaccttc
caggccgccctgtccctggcgctgggcctcgccgacgtggtcaccgccgagtccggcggc
caggcgatggacgcgctgttcatcgacgaggggttcggcagcctcgacccggacagcctg
gaggaggtcatgaacgtcctggacagcctgcgctccggtggccggctggtcggcatcgtc
agccatgtcgcggacctgcgccaacgtatccccacccagatcaccgtcatcaaacaggcc
aacggcagccacgtacgcaccaccgtctga
DBGET
integrated database retrieval system
