Francisella tularensis subsp. novicida F6168: AS84_899
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Entry
AS84_899 CDS
T03873
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ftd
Francisella tularensis subsp. novicida F6168
Pathway
ftd03420
Nucleotide excision repair
ftd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ftd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AS84_899 (uvrD)
03430 Mismatch repair
AS84_899 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftd03400
]
AS84_899 (uvrD)
Enzymes [BR:
ftd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AS84_899 (uvrD)
DNA repair and recombination proteins [BR:
ftd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AS84_899 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AS84_899 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DUF4252
DEAD
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AJI46144
LinkDB
All DBs
Position
933937..936159
Genome browser
AA seq
740 aa
AA seq
DB search
MSNYDFILGLNPEQQKATLLEDRNALILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV
TFTNKAAKEIQQRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLVKKVINNLDLDDKKYPPKLLQNFINKQKDKAIRSNKLTKQYDANYAHIYTAYEERLQL
DNALDFADLLLHLYELFSFNQQLREYYQNKFKYILIDEFQDTNHVQYMWLKLLITDNNYM
MAVGDDDQSIYGWRGAVVDNIHNYVKDLKNVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVELYCAVNERDEAKYIIDKIRQLHNDGVDYSDIAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEIKDALAYLRLAVTNSDNLAFERIINTPTRGIGNKTL
ETIRNYAQINSLSYWQATLDVIQKELVTKRTASLLLKFIELINGISAQISQHSLDKLLES
VINQSGLLASYQEKNSEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGDMQADEATDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIVNSEEVFDNTSSKKMQ
EKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFVAEIDSQHLSQGKLEFA
AAKPKTKQKANFGMSPFDFLKSNNTTNSFKPGDKVFHKVFGKGVFIKAQAQGTKEFYTVD
FGIDVGQKILLADISNLVKV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattatgactttatcttaggattaaatccagagcagcaaaaagctacattacta
gaggatcgtaatgctttgattctcgctggtgctggcagtggtaaaacaaaagttctaaca
tcacgtatagcttatctttgtcgtgataaaggcgtatctgtagaaaatatccttgccgta
acattcactaataaagcagcaaaagagatccagcagcgtgtagaaaagatgcttgggatt
tctacatttggaatgtggataggtacttttcatggtattgcacatagactattgcgtaag
catgctcatgaacttggcttagataagaactttaggatacttgatcaagatgagcaggca
caacttgttaaaaaggtaatcaataatctagatcttgatgataaaaaatatccgcctaaa
ttactgcagaattttatcaataaacaaaaagataaagctatccgtagtaataaactaaca
aaacagtatgatgccaattatgcgcatatttatacagcttatgaagaaagacttcagctt
gataatgctttggattttgcagatttgcttttacatctttatgagcttttttcttttaat
caacagcttagagaatattatcaaaacaaatttaaatatattttgattgatgagtttcag
gatactaaccatgttcaatacatgtggctaaaattacttataactgataataactacatg
atggcagttggcgatgatgatcagtcaatatatggttggcgtggtgctgtcgtagataat
atccataattatgtaaaagatctcaaaaacgttgaaattataaaactagaacaaaactat
cgctcaacaaaaaatattctaaaagtagctaattcagtaatcaaaaataatgataatagg
atgtcaaaggagctgtggtcagcagctgaagatggtgaaaaagtagagctttattgtgcc
gttaatgagcgtgatgaggcaaaatatattatagataaaattcgccagctacataatgat
ggtgttgattatagtgatatagctatcttatatcgttcaaactatctatcacgtgtctta
gaggaaagttgtatttatgcaagtattccatataggatttatggcggttttaggttcttt
gatagagcagagattaaagatgctttagcatacttaagattagctgttacaaatagtgat
aatttagcatttgagcgaattattaacacaccgacgcgtggaattggtaataagacatta
gagacaattagaaattatgcgcaaattaattcattatcatattggcaagctactttagat
gttattcaaaaagagcttgtaactaaaagaacggcaagtttacttttaaagtttatcgaa
ttaattaatggtatttcggcacaaataagtcagcatagcttagataagctcttagaatca
gtaataaatcaaagtggtcttttagcatcatatcaagaaaaaaatagtgaaaaggatcgc
caaaagattgataacttaaaagagttgataagtgcagctaaagattttgaaccacagata
gagttacttgatgataatactgacatactacaagatttcttgtcatttgctgttctagaa
gctggtgatatgcaagctgatgaagctacagatagtgtgcagttaatgactattcatgct
tcaaaaggtttagagtttcgttatgtgtttctagttgctgcagaagaaggggtttttcca
ccaagttcaattgttaactctgaagaagtgttcgataatacaagctctaagaaaatgcaa
gagaagcttgctgaagagcgtcgccttttttatgtagcagtaacaagagctatgaaagcc
ttaactataagttatgcacaagtacgtaatatctttggtcgtagtagttttcaagttaag
tcacgtttcgttgcagagatagactctcagcatttgagtcagggtaaactagagtttgca
gcggctaaacctaaaactaaacaaaaagcaaattttgggatgtcgccttttgattttctt
aaatcaaataatactaccaatagttttaaacctggtgataaagtatttcataaggttttt
ggcaaaggagtatttataaaagcgcaagcacaagggacaaaagagttttatactgtagac
tttggtatagatgttggtcagaaaatattgctagcagatatctctaatctggttaaggtc
tga
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