KEGG   Francisella tularensis subsp. tularensis FSC198: FTF0144
Entry
FTF0144           CDS       T00381                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ftf  Francisella tularensis subsp. tularensis FSC198
Pathway
ftf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ftf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FTF0144 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ftf03021]
    FTF0144 (rpoB)
   03400 DNA repair and recombination proteins [BR:ftf03400]
    FTF0144 (rpoB)
Enzymes [BR:ftf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FTF0144 (rpoB)
Transcription machinery [BR:ftf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FTF0144 (rpoB)
DNA repair and recombination proteins [BR:ftf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FTF0144 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_7
Other DBs
NCBI-ProteinID: CAL08160
UniProt: Q14JT5
LinkDB
Position
154939..159015
AA seq 1358 aa
MSYSYAEKKRIRKEFGVLPHILDVPYLLSIQTESYKKFLTADAAKGRLHSGLEIVLKQSF
PVESKNGQYELHYVDYQIGEPTFDETECQVRGATYDAPLNVKLRLVVYNKDALPNEKIVE
DIREEYVYMGDIPLMTTNGTFIINGTERVVVSQLHRSPGVFFSKDDSEEGAFSARIIPYR
GSWLDFEFDSKGIIWARIDRKRKFCATVILKALGYTQEQILENFSESKTITFNSKGFALR
LDNLSNMKGELLKFDIVDAQDNVIVKKNKKLTSRDVKKIKDAGVDSVAIDFDLVSTLRVA
KDIVNEATGEVIAYANDDVTESLLESCVEVGMLELEVIDFITTERGRYISDTLKYDLTRN
TDEALVEIYKVLRPGDPPAAASVKALFEGLFFIESRYSLSDIGRMKLNARLGSDKVSKDI
YTLENSDIVGVIEELINIRDGKGKVDDIDHLGNRRVRSVGEMVENQFRIGLYRVEKGIRE
SMSLVHKDKLMPKDIVNSKPITAAIKEFFTSGALSQFMDQDNPLSEVTHKRRISALGPGG
LSRDRAGFEVRDVHATHYGRLCPIETPEGPNIGLINSLASYARVNDYGFLEAPYRKVVDG
KVTDEIEYLSAIDEDNYVIAQASTKLDENNHFVEDLIQCRSGGEAIFTESSRVQYMDVSA
KQMVSAAAALIPFLEHDDANRVLMGANMQRQAVPTLKSEKPLVGTGMEKIVARDSGNCII
ARNAGEVAEVDSNRIVIKVDTEKSQTSNLVDIYSLTKFKRSNKNTCINQRPIVNVGDKVE
AGDILADGFATDFGELSLGHNLMVAFMPWNGYNFEDSILLSERIVKDDKYTSIHIEEFTC
VARDTKLGPEEITADIPNVSESSLAKLDESGIVHIGANVEAGDILVAKITPKAEQQLTPE
ERLLRAIFNEKASNVADSSLRMPSGTSGTVINVQVFENDKGGKSKRALKIEKELIDKARK
DFDEEFAVIESVVKSSIEQEVVGAKIQKAKGLKKGAILTKEFLATLPFSKWLEISFEDEK
LEEKVQNAREYYEEAKIAIDAKFEAKKKSITQSNELSPGVLKTVKVFVAIKKRIQPGDKM
AGRHGNKGVVSRVLPVEDMPYMEDGTPVDVCLNPLGIPSRMNIGQILEAHLGLASYGLGK
KIEKTLEKTRKAAELRKTLEEVYNSVGDKKVNLEALNDEEILTLCDNLKGGVPIATPVFD
GAKEEDIKSLLKIGGFATNGQMKLFDGRTGKPFDRHVTVGYMYMLKLDHLVDDKMHARST
GSYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTLREMLTVKSDDIAGRSKMYKNI
VDGKLTMNVDVPESFNVLRNEVRALGIDMDFDYSSEEE
NT seq 4077 nt   +upstreamnt  +downstreamnt
atgtcttactcatacgctgagaaaaaaagaattcgtaaagagtttggggttcttcctcat
atcttagatgtaccatatttgctttctattcaaacagagtcatacaaaaaattcttgact
gcagatgcagcaaaaggaagacttcactctggacttgaaatagttttaaaacagtctttt
cctgttgagagtaaaaatggtcaatatgaacttcactatgttgattatcaaattggtgag
cctacttttgatgaaactgaatgtcaggttcgtggtgctacttatgatgcaccattaaat
gtgaagttaagattagttgtatataataaagatgctcttccaaatgagaaaattgtcgag
gacattagagaagagtatgtgtacatgggcgatattccgctaatgacaactaatggtact
tttatcattaatgggacagaaagagtagtagtctctcagttgcatagatcaccaggggtg
ttctttagtaaggatgactctgaggaaggagcattctcagcacgtattatcccatataga
ggctcatggcttgattttgaatttgactcaaaaggtattatatgggctaggattgataga
aaaagaaaattctgtgctacagttattttaaaagctcttggttatactcaagagcaaata
ttagagaatttttctgagagtaagactattacttttaatagtaaaggttttgctcttaga
cttgataacctttcaaatatgaaaggtgagctgcttaagtttgacattgtagatgctcaa
gataatgttattgttaaaaagaataaaaaattaacttcaagagatgttaagaaaattaaa
gatgcaggcgttgactctgtagctattgattttgatttggtcagcactcttagagttgca
aaagatatcgttaatgaagcaacaggtgaagtgatagcttatgctaatgacgatgttaca
gaaagtttattagagtcatgcgtagaagttggcatgcttgaattagaagttattgatttt
ataactactgaaagaggtaggtatatatctgatactttaaaatatgatcttacaagaaat
actgatgaggcacttgtcgagatatataaggtattacgaccaggtgatcctcctgcagca
gcttcagttaaagcattatttgaaggtttattctttattgaaagtagatatagcctttct
gatattggtagaatgaagctaaatgctagattaggttcggataaggtatctaaagatatc
tatactttagaaaatagtgatatagttggcgtaattgaagagcttataaatatccgtgat
ggtaaaggtaaagttgatgatattgatcatttaggtaacagacgtgtacgttctgttggc
gagatggttgagaatcagtttagaataggcctctaccgtgtagagaaaggtattcgtgaa
agtatgtctttagtacataaagataagcttatgccaaaagatatcgttaactcgaagcca
atcacagcagcaattaaagaattctttacttctggagcgttatcacaatttatggatcaa
gataacccattgtcagaagttacacataagcgtagaatatctgcattaggtccaggtggt
ttatcacgtgatagagcaggttttgaagtacgtgatgttcatgcaacacactatggtaga
ttatgtccaattgagactccagaaggtccaaatattggtctaattaactcattagcaagt
tatgctcgtgttaatgattatggtttcttagaagcaccatatcgaaaagttgttgatggt
aaggttacagatgaaattgaatacttatctgctatcgatgaagataattatgtaattgct
caagcatcaactaaacttgatgaaaataaccattttgttgaagatcttattcaatgtcgt
tctggtggtgaggcaatatttactgagtcaagtagagttcagtatatggatgtttctgct
aaacagatggtttcagcagctgcggcactaattcctttccttgagcatgatgatgctaac
agggtattgatgggtgcaaacatgcaacgtcaagcggtaccgactcttaaatctgagaag
cctttagtcggtacaggtatggagaagattgttgctagagattctggtaattgtattatc
gcaagaaatgctggtgaagtggctgaagttgattctaacagaatcgttattaaagtagat
actgaaaaatcacaaactagtaatttggttgatatttatagtttaactaaatttaaacgc
tcaaacaaaaatacttgtattaaccagcgtccaatagtaaatgtgggtgataaagtagaa
gctggtgatattttagcggatggttttgcaactgattttggtgaattgtcactagggcat
aacttgatggttgcttttatgccatggaatggttataactttgaggattcgatcttacta
tctgaaagaatagtaaaagatgataagtatactagtatccatattgaagagttcacatgt
gtggctcgtgatactaagcttggtcctgaagagataactgcagatattccaaatgttagt
gagtctagtttggcaaaacttgatgaatcaggtatcgtccatattggcgctaatgtcgaa
gcaggcgatattttggtagctaagattactccaaaagctgagcaacaactaactcctgaa
gagagactacttagagcaatctttaatgaaaaagcatcaaatgttgctgatagttcatta
agaatgccaagtggtacttctggtacggttattaatgttcaagtatttgagaatgacaaa
ggtggtaaaagtaagcgagctcttaagattgaaaaagaactgatcgataaagctcgtaag
gattttgatgaggagtttgcagtaattgaatctgtagttaaatcatcaattgagcaagaa
gttgttggtgcaaaaatccaaaaagcaaaaggtcttaaaaaaggtgctatccttacaaaa
gaatttttagcaacactacctttctctaaatggctagaaatttcttttgaggatgagaaa
cttgaagagaaagttcaaaacgctagggagtattatgaggaagctaaaattgctatagat
gctaaatttgaagctaagaaaaaatctattactcagagtaatgagctatctccaggtgtg
cttaagactgttaaagtttttgttgcgattaaaaagcgtatccagccaggtgataagatg
gctggtcgtcatggtaacaaaggtgtggtttcacgcgtattaccagttgaagatatgcca
tatatggaagatggtactcctgtagacgtttgtctaaatcctttaggtatcccatcacgt
atgaacattgggcagattttagaagcacacttaggattggcttcatatggtttaggtaaa
aaaatcgaaaaaactttagagaaaactagaaaagcagctgaactaagaaagactttagaa
gaagtatataatagcgttggcgataagaaagttaatcttgaggctttaaatgacgaagag
atactaactctttgtgacaacctaaaaggtggagtaccaatcgctacaccagtatttgat
ggtgctaaagaagaagatattaaatcactactgaaaataggcggctttgcaactaatggt
cagatgaagctttttgatggtcgtactggtaagccttttgatagacatgtaactgttggt
tatatgtatatgctaaaactagatcacttagtagatgataagatgcatgcaagatcgact
ggctcatatagtctagttacgcagcaaccattaggtggtaaagcacagtttggtggacaa
agattcggtgagatggaagtttgggcattacaagcatatggtgctgcttatacattaaga
gagatgctaacagttaagtcagatgacatagcaggtagatctaaaatgtataagaatata
gttgatggtaagttgactatgaatgtagatgttccagaatcattcaatgttttaagaaat
gaagttagagcattgggtatagatatggattttgactattcatctgaggaagaataa

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