Francisella tularensis subsp. mediasiatica FSC147: FTM_0716
Help
Entry
FTM_0716 CDS
T00698
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ftm
Francisella tularensis subsp. mediasiatica FSC147
Pathway
ftm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ftm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTM_0716 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ftm03019
]
FTM_0716 (rne)
03009 Ribosome biogenesis [BR:
ftm03009
]
FTM_0716 (rne)
Enzymes [BR:
ftm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FTM_0716 (rne)
Messenger RNA biogenesis [BR:
ftm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FTM_0716 (rne)
Ribosome biogenesis [BR:
ftm03009
]
Prokaryotic type
rRNA processing factors
FTM_0716 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
DnaJ_CXXCXGXG
Flu_C_NS1
Motif
Other DBs
NCBI-ProteinID:
ACD30694
LinkDB
All DBs
Position
complement(781651..784308)
Genome browser
AA seq
885 aa
AA seq
DB search
MKRILINSKSGEETRIATLDNGKLIDLDIESVDREQKKANIYKGYISRIEPSLNAIFVNY
GEEKNGFLPFKEVSEYYLKDVPNGENIAPLLSEGQELIVQIDKEERGDKGAALTTFITLA
GSYMVLLPNNPEGGGISRRVEGEDRERLKKYLKELNIPKNMSVIARTACVECSFEELKHD
FDTLVELWGSILQAYHRIKKPALLHKESDIIVRTVRDHLKEDVKEIIVDSKECFEDVKRQ
LSLLRQSFDINKVKLYNEELPLFAQFGIDQQIENAYKREIRLTSGGSIVIDTTEALVAID
VNSSRANKAEDVETTAFKTNLEAAEEVARQLRIRDLGGLVIVDFIDMSFYPNRKQVEEKL
MEALQQDRARIQMSRISKLGLVEISRQRLSSSINESVMQKCPRCEGHGFIKTTQATALTI
LRKIRAEAIKEDTNEIRVQVPVDIAAYILNEKRDSIVEIERISQVKVMIIPNFNMESPKF
QMQRIWGTSYKSNRTSSELIEDVYNIEIPKAGKKKIAAVDLNQAIENQAASNTQEQKPQT
DAQVDIVTQNDKKQDDVTQQAKKKGFFARLFSGIFATDSKAAQQANNSAQKQQNKEQNFQ
RQQQHNKAQKDNNQRNERNNSNNKNERNKNRNNKGAKPQIAQENKPQKDNSQRSDLNANG
NSNNDKNERNKNKSNNDKFDKKSNNRNSRSNNLNLNNAEEVIDITQLKYQNQTAIAKTDN
IKKVISKNPDEFISVMVKDVLENYDSLKDDGATKIATQEKIKTNKYLKFDTVSVDTEIAL
LNEVAKSNQTVGVEQITAETEESLSIVDKVDDITIPEVVVEQEKPAKVVKETNQTSEAKP
KKEKQTTTKNNKKEKPAEKEMKQNQAKPEYINYSPAIDFESQTLI
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatactaataaatagcaagagtggcgaagaaacaagaattgccaccctagat
aatggcaaattaatagatttagacattgagagcgttgatagagaacaaaaaaaagcaaat
atttacaaaggttatatttcaagaattgaaccaagtttaaatgctatatttgttaactat
ggtgaagaaaaaaatggttttttaccatttaaagaagtatcagagtattatctaaaagat
gttccaaacggtgaaaatatcgcacctttgctttcagaggggcaagaactaattgttcaa
atagataaagaagaacgaggcgataaaggtgcagcattaactacatttattaccttggct
ggttcgtatatggtgttattgccaaataatcctgaggggggtggtatttcccgtcgtgtc
gaaggtgaagatagagaaagattaaaaaaatatctcaaagaattaaatatcccaaaaaat
atgagcgtaatagcaagaactgcttgcgttgagtgctcttttgaagaattaaaacatgat
tttgatactctagttgaattatggggatctattttacaagcttaccatagaatcaaaaaa
ccagctttattacataaagaaagtgacattattgtaagaacagttagagatcacttaaaa
gaagatgttaaagaaatcatcgttgattctaaagagtgctttgaagatgtcaaaagacag
cttagtttacttagacaaagttttgatataaacaaagtaaaactatacaacgaagaatta
ccattatttgctcagtttggtattgatcaacaaatagaaaatgcttataaaagagaaatt
cgcctaacatctggcggttctatcgtcatagatactacagaggcacttgtagcaatagat
gtaaactcatctcgcgctaacaaagccgaagatgtagaaactacagcatttaaaactaac
ctagaggctgcggaagaagttgctcgtcaacttagaattagagacttaggtggtcttgtt
atagttgactttattgatatgtctttctacccgaatcgaaaacaagtcgaagaaaaacta
atggaagcactacaacaagatagagcacgcatccaaatgtcacgcatttctaaacttgga
cttgttgagatctcaagacaacgtttaagttcttcaattaatgaaagcgtaatgcaaaaa
tgcccacgttgtgagggtcatggttttatcaaaactacgcaagctacagcacttaccatc
ctacgtaaaatcagagcagaagccattaaagaagataccaacgaaattcgtgtccaagtt
cctgtagacatcgcagcatatatactaaatgaaaaaagagatagtattgttgagattgag
agaatttctcaagttaaggttatgattattcctaactttaatatggaatcgccaaagttt
caaatgcagagaatctggggtactagctacaaatcaaatcgtacaagctcagaattaata
gaagatgtttataatattgaaattcctaaagctggtaagaaaaaaattgcggctgtggat
ttaaatcaagctattgaaaatcaagctgctagcaacactcaagaacaaaagcctcaaact
gatgctcaagtagatatagttacacaaaatgataagaaacaagatgatgtaactcaacaa
gctaagaaaaaaggcttctttgctaggctttttagcggtatatttgcaactgattcaaaa
gctgctcagcaagctaataactcagctcaaaaacaacaaaacaaagaacagaatttccaa
aggcagcaacaacataataaggcgcaaaaagataataatcaacgtaatgagcgtaacaat
agcaacaacaaaaatgaacgcaataaaaatagaaacaacaaaggagcaaaaccacaaata
gctcaagaaaataaaccacaaaaagacaatagccagcgtagtgatctcaatgctaatggt
aacagtaacaatgataaaaatgagcgcaataaaaataaatcaaacaatgataagtttgat
aaaaaatcaaataaccgtaacagcagaagcaataatttaaatctaaataatgctgaagaa
gttattgatattacgcaacttaagtatcaaaatcaaacagctattgcaaagacagataat
atcaaaaaggtgatttcgaagaatcctgatgagtttatctctgtaatggttaaagatgtc
ttagaaaactatgatagtctaaaagacgatggtgctacaaagatagctacccaggagaaa
attaaaactaacaaatacttaaagtttgatactgtatctgtagatactgaaatagctcta
cttaatgaagtcgctaaatcaaatcaaactgttggagttgagcaaatcacagctgaaaca
gaagaatctttaagtatcgttgataaagttgatgacataacaataccagaagttgtagta
gagcaagaaaagccagcgaaagtagttaaagaaactaatcaaactagtgaagctaaacct
aaaaaagaaaagcaaactactacaaaaaataataagaaagaaaaaccagctgaaaaagag
atgaaacaaaatcaagctaaacctgaatatataaactattcaccagcgattgattttgaa
tctcaaacactaatatag
DBGET
integrated database retrieval system
