KEGG   Fusobacterium varium: FV113G1_34990Help
Entry
FV113G1_34990     CDS       T05280                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
fva  Fusobacterium varium
Pathway
fva00473  D-Alanine metabolism
fva00550  Peptidoglycan biosynthesis
fva01100  Metabolic pathways
fva01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:fva00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    FV113G1_34990 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    FV113G1_34990 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    FV113G1_34990 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:fva01011]
    FV113G1_34990 (ddl)
Enzymes [BR:fva01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     FV113G1_34990 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:fva01011]
 Precursor biosynthesis
  Amino acid ligase
   FV113G1_34990 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 CPSase_L_D2 ATP-grasp_4 RimK ATP-grasp ATPgrasp_ST GARS_A TTL
Motif
Other DBs
NCBI-ProteinID: BBA53146
UniProt: A0A250LZ00
LinkDB All DBs
Position
complement(3897093..3897959)
Genome map
AA seq 288 aa AA seqDB search
MKIAVFMGGISSEREVSLKSGKAILESLLKQGYDAYGIDVTKENLVSAFIENEYDFAYLA
FHGGFGEDGRVQGLLDMLGKPYTGSGAEASGIAMDKVITKKLAESAGVRVAKNYDKVSDI
DSYPVVIKPALEGSSVGIFFCHNKEEAEKAAAELAGKKIVIEEMITGEELTVGVINGEGI
GVLRIIPKNEFYDYESKYAEGGSVHEYPAKIDKKAYDEALENAVKVHNVLGLAGISRSDF
ILKDDKVYFLEVNTLPGMTKTSLIPDLATLKGYTYDDVVRIMVETFKR
NT seq 867 nt NT seq  +upstreamnt  +downstreamnt
ttgaagatagctgtatttatgggaggaatttcttctgaaagagaagtttctttaaaaagt
ggaaaagcaattttagaaagtcttttaaaacaaggctatgatgcatatggaatcgatgtt
acaaaagaaaatcttgtttcagcttttattgaaaatgaatatgattttgcatatcttgca
tttcatggaggatttggagaagatggaagagtgcaggggcttcttgatatgcttggaaaa
ccatatactggatcaggagcagaggcaagtggaatagctatggataaagttatcactaaa
aaacttgctgaaagtgcaggagtaagagttgcaaaaaattatgataaagtatcagatatc
gattcatatcctgttgtaattaaaccagctttagaaggttcaagtgtaggaatatttttt
tgtcataataaagaagaggcagaaaaagcagctgcagaacttgctgggaaaaaaattgtt
atagaagagatgataacgggagaggaacttacagtaggagttattaatggagaagggatt
ggagtacttagaataattcctaaaaatgagttctatgattatgaatcaaagtacgctgaa
gggggatcagtacatgagtatcctgctaaaatagataaaaaagcatatgatgaagctctt
gaaaatgctgtgaaggtgcataatgtgcttggattggcaggaatatcaagaagtgacttc
attcttaaagatgacaaagtatatttccttgaagtgaatacacttcctggaatgacaaaa
acaagtcttattccagatctggcaactttaaaaggatatacttatgatgatgtagtaaga
ataatggtagaaacatttaaaagataa

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