Fragaria vesca (woodland strawberry): 101294548
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Entry
101294548 CDS
T02666
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101294548
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
101294548
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
101294548
NCBI-ProteinID:
XP_011461689
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Position
LG3:24059894..24073429
Genome browser
AA seq
1956 aa
AA seq
DB search
MWTNVFKLPGFNQLSWFQYLPHESELLQLPDKSSVKDAATQMVLSAHLQLQKEGLLSTWT
NSFVGPWDPSQGFHNPDEKIKLWLFLPGRYSTVTDSAQVAVSKLRVVASGVWISPGDSEE
VATALSQALRNRIERVLSGFAYMRFGDVFSKFHPSQNEELLRKGQPTVEFIFSATEEGIF
VHALVSAKHVRALSSGDLERVLKHSSKNSGYRLPVIASPHGICGRLTGCCPSDLVKQVYF
SSSSKSKTSNGLIGLPNHVSQGSDCQLRGQSCYVEVTLGCPRPGSDRALQSNSHSFRNLV
KHQVAESPALGRGDQKGSLNNSTVYEKTFVYPAEAVLVPTLQFVRSSLKRFWLQNWIGPS
MPGSSFFMLCSSDSIDPMEEWNETNGIRTQRGYNSSSNSNCSSISSISSSSSETDYKMAT
GAGELEADADSLSSRQSGLSFNDRSENDSFKLQGSKRPRAGMTDSFAQVGTSTSASLQDT
YKSDYGSVEVNNSAITGFANEQSGSLWDWDWDDSDNGTDIHALLDEFGGFGDFFENDALP
FGEPPGTAESQTLMLSGPDCGDVVDNPVGPMDVSDQMLLSESFASFESLIPPPPAAMEEG
LGKNQGVGNGALASGPVNCSSASNVSEFDHILKAEALMTFAPEYGAVETPTSEVSSSIYR
SPYLPQSRKVESSSSSANNYTYGATPPSPCLDVCDEKTGVPTNSKAFPGKKDANNILGSK
NYYTHVGSGKEQQDRRLFTSSKDTVLTHDGATPSTFPTFNSANAVKASQRKMIEGTFDAE
NSFLYMNTIPATEIECLIFQASMCRIRHTLLSSSSLSSLGRLPGDPSMMTDNILGKYELK
RKDSIPIRIAGDIDGGIIDGHLNAPVGVWRSVGAPRVSKPSSSSSMEISTSLPHTSFSEE
GMLSYGQRQPLQELLDGITLIVQQATAFVDLALDSDCGDGPYGWLALQEQWRKGFSCGPS
MIHAGCGGTLASCHSLDIAGVELTDPLSADVHASSVISLLQSDIKMALKSAFGMLDGPLS
VTDWCKGRNQSGETTVDGLSGESTISDCRDSSSTVALSTGEPLSPSPSVGSAGLKDVGKV
DETSQRRSNPENCSSESDLQMSARLRPTLLVAPSPAILVGYQDDWLKTSASSLHLWEKAP
LEPYALQKPISYCVICPDIDPLTSAAADFFQQLGSVYETCKLGTHLPQSCGNQMEVDSGK
LSSAGFVLLDCPQAMKIESSNASLVGSISDYFLSLSNGWDLTSYLKSLSKALKALKLGQC
LSTNAKEGSSSPSMVIYVVCPFPEPIAVLQTVIESCVAIGSVVFQSDRERRSMLHSQVSK
ALSYSAAVDEASISNVLVLSGFSVPRLVLQIVTVDAIFKVTSPSLNELVILKETAFTVYN
KARRISRGSSNDTVQSSSSNRSHSVLTQMSSPGMWKDCVGPRITGHSLPREGEIDASLRT
GTWDGSWQTRTGAVSCDPSRIGDMFLQDETRYMFEPFFILAEPGSVERGISPLASNNYPS
ESSKPLSDESGGVFMPTATGDTGSGSQADASEADKTPSLHCCYGWTEDWRWLICIWTDSR
GELLDSHIFPFGGISSRQDTKGLECLFVQVLQQGCQILQVCSSDTGMTKPRDFVIARIGS
FYELEYQEWQKAINTVGGSEVKKWNLQLRRSVSDGMSASSNGPSLQQQEMSLIQERNLPS
SPGPLYGSPHSKMSGYMKGGLGQPSGRKQLMGAHTLIDSSRSLLQWVQSITFVTIAIDHS
LQLAFQADIPSPGAQGGFGVGSSGYLEGFTPVKSLGSTPASYILIPSPSMRFLPPTPLQL
PTCLTAVSPPLAHLLHSKGSAIPLSTCFVVSKAVPTMRKDYRSNLKEEWPSTLLVSLIDH
YGGNNFSQEKIMRGNAKQLGRSPGSEAREFETEAHAILESVAAELHALSWMTLSPAYLDR
RTALPFHCDMVLRLRRLLHFADKELSKHPEKAQSVG
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaatgttttcaaacttcctggttttaatcaattatcatggtttcaatatctc
ccgcatgagtcggagttgctccaactaccagacaaaagcagtgtgaaagatgctgccaca
cagatggtactttccgcacatttacagttgcagaaggaaggattactcagcacgtggacc
aattcctttgttgggccgtgggacccatcacagggctttcacaatccagatgagaagatt
aaactgtggcttttcctgcctgggcgttattcaactgttactgactctgctcaagttgca
gtctctaaattaagagttgttgcatctggagtttggatatctcctggggactcggaagag
gttgcaactgccctttctcaggctctgaggaatcgtatagagagagtgctatctgggttc
gcctatatgaggtttggtgatgtattttcaaagtttcatccatcacaaaatgaagagctt
ctcaggaaaggacagcctacagttgaatttattttttctgcgactgaagaggggatattt
gtgcatgctttagtatctgcaaagcatgtccgagcactttccagtggtgatttggagaga
gtactgaagcattcttccaaaaattctggttataggcttccagtaatcgcatctcctcat
ggaatatgtggtaggcttaccggatgttgcccaagtgatcttgtgaaacaagtgtatttt
agcagttctagcaagtctaagacttcaaatggtttaattggtctgccaaatcacgtctct
caaggttctgattgccaactgaggggtcaaagttgctatgttgaggttactctgggttgt
cctagacctggaagtgacagggccttgcaatcaaactcacattccttcaggaatctagtg
aaacatcaagttgccgaatctcctgctttgggaagaggtgatcaaaagggatctttgaat
aattcaacagtttatgagaaaacatttgtatatccagctgaggcagtgcttgtcccgact
ctgcaatttgttagatcgtctttaaaaagattttggctgcagaattggatagggccttcc
atgccaggctcatctttcttcatgctttgcagttctgatagcatagatcctatggaggaa
tggaatgaaaccaatggtattcgtacacaacgtggctataatagtagtagcaacagtaat
tgtagcagcattagtagcataagtagcagctcaagtgaaactgattacaagatggcaaca
ggagccggtgaactagaggctgacgctgattctttaagcagtagacagtctggtttatct
tttaacgatcgttcggaaaatgatagctttaaattgcagggttctaagcgccctcgagct
gggatgactgactcatttgctcaagtgggtacatctacaagtgcttctttgcaggacaca
tacaagtctgattatggttctgtggaagtcaacaactcagcgatcactggatttgcaaac
gaacagagtggatctctttgggattgggattgggatgatagtgacaacggcaccgatata
catgctttgctggatgagtttggaggttttggagacttctttgaaaatgatgccttgcca
tttggggagcccccaggaactgcagaatctcagacgcttatgttgtccggtccagattgt
ggcgatgtagttgacaatccagttgggcctatggatgtttctgatcagatgcttttgtcc
gagagttttgcatccttcgaaagccttattccaccccctccagcagccatggaagagggg
cttggcaaaaatcaaggagttggaaatggtgctttggcatcaggtcccgtgaactgctct
tctgcatctaatgtcagcgaatttgatcacatattaaaagctgaggcactgatgacattt
gctcctgaatatggagctgttgaaacccccacaagtgaagtctcatcatccatttaccga
agcccttacttgccacaatctagaaaagtggagagttcaagttcaagtgcaaataattac
acatatggtgcaaccccaccttctccttgccttgatgtatgtgatgagaagactggcgtg
ccaacgaattcaaaagcatttcctggaaagaaagatgcaaacaacattctcgggtcaaaa
aactattacacccacgtagggagtggtaaagagcaacaagacagaagattgtttacaagt
agtaaagacactgtactcacacatgatggggctacaccatcgacattcccaactttcaat
tctgcaaatgctgtcaaagcatctcagaggaaaatgattgaggggacatttgacgcagaa
aattcctttttgtatatgaataccattcctgcaactgaaattgaatgcctcatatttcaa
gcgtcaatgtgtagaatacggcacacattattgtcttcgagtagtctttcatctcttggt
aggctgcctggtgacccaagtatgatgacagataacatattgggaaagtatgagctgaag
aggaaagattcaataccaattagaattgctggtgatattgatggaggaataattgatgga
catcttaatgcgcctgttggtgtttggcgctctgtaggagctcctcgggtctcgaaaccc
tcaagttcatctagtatggaaattagcacatccttgcctcatacttcattcagtgaggaa
ggtatgctttcttatgggcaacgacaaccacttcaggaacttcttgatggcatcacattg
attgtacaacaagctactgcttttgttgatttggccctggactcagattgtggtgatggc
ccttatggttggcttgctttacaagagcagtggagaaagggattttcttgtggaccttct
atgattcatgcaggttgtgggggtacacttgcttcttgtcactccctggacattgccggt
gttgagttaactgatccactctctgctgatgttcacgcttcatctgtgattagtttgctg
cagtctgacataaagatggccttaaagtctgcatttggtatgttggatgggccattgtct
gtgactgattggtgcaaaggccgcaaccaatcaggtgaaaccacagttgatggattatct
ggtgagtccactataagtgattgtagagattcatcaagtactgtagcactatctacgggg
gaaccattgagcccatcaccttctgttggatcagctggccttaaagatgtagggaaagtg
gatgagacatcccaaagaagatcaaacccagaaaactgtagttctgaatctgatctgcag
atgagtgcgcgtctaagaccgacacttttggttgctccgtcgcctgctatacttgttggg
tatcaggatgattggcttaagacatcagcaagctctctgcacctctgggaaaaggctccc
cttgagccatatgctcttcaaaaacctatttcttattgtgttatatgtccagacatcgat
cccctaacatctgccgctgctgattttttccaacaactaggaagtgtttatgaaacatgc
aaattgggaactcatttgcctcagagttgtgggaatcaaatggaggttgactctggaaaa
ttgtcatctgctggattcgtgctgcttgattgccctcaagcgatgaagattgaaagcagc
aatgcatctcttgtggggtcaataagtgattattttctttctctttcaaatggttgggac
ttgacgagctacctgaagtctctttcaaaggctctcaaagctttgaaacttggtcaatgc
ttgtctacaaatgcaaaagaaggaagtagcagtccttctatggtgatatatgtggtgtgc
cccttccccgagcctattgcagttttacagacagttattgaatcttgtgttgctattgga
tctgttgtcttccaatcagacagagaaaggagatctatgttgcacagtcaggtttcaaag
gcattaagctactcggcagcagtggatgaagcatcaatatcaaatgttttagttctctct
gggtttagcgttcctagattggtactgcagattgtgacagttgatgccattttcaaagtt
actagtccatcactgaatgagcttgtgattcttaaggagactgcttttactgtttacaac
aaggctcgtcgaatatcacgaggatcttctaatgatacagtccagtcttcatcttctaat
agatcccattcggtcctcacacaaatgtcttctccggggatgtggaaggattgtgttgga
cctcgtattactgggcattccctaccaagagagggtgaaattgacgctagtttgaggact
ggtacctgggatggttcatggcaaacaagaactggagctgtaagctgtgatcccagccga
attggagatatgttccttcaagatgaaactcgctacatgtttgagccattttttattctt
gcggaacctggttctgtagagcgtgggatttcacctttggcttctaataactatccatca
gaatcttctaagccattgtccgatgaaagtggtggagtgtttatgccaactgcaactggg
gatactggatcaggctctcaagctgatgcatctgaggcagacaagactccaagtctacat
tgttgctatggatggacagaggactggcgttggctaatatgcatctggacagattcaagg
ggagaattacttgatagccacatattcccctttggtggaattagcagtagacaagacaca
aagggactggagtgcctttttgtccaagttctgcagcaaggctgtcagatactgcaggta
tgctcttctgatactggaatgacaaaacccagggacttcgtgattgcacgcatcggaagt
ttctacgaacttgaataccaagagtggcagaaggcaatcaataccgttgggggttcagaa
gtgaaaaaatggaacttgcaattgcggagatctgtatctgatgggatgtctgctagtagt
aatgggccatccttgcagcagcaggaaatgagtttgattcaagaaagaaatctgccttcg
tcacctggccctctgtatggaagtcctcactcaaagatgtctggatatatgaaaggtggt
ttgggacaaccttctgggagaaagcagttaatgggtgcacatacattgattgacagctca
agaagtttgcttcagtgggtgcaaagcatcacctttgtcacaattgcaattgatcattct
ttacaacttgcctttcaagcagatataccatctcctggagctcaaggtggttttggtgtg
ggctcatctggatatttggaaggcttcacgcctgtgaagtctcttggctccacacctgct
tcttacattctgatcccatcacctagcatgcgtttccttcctccaacaccgcttcagctg
cccacatgtctcactgctgtatcacctccactagcacatctccttcacagcaaaggctct
gctattcccctttctacttgttttgtggtttcaaaagctgtacctactatgaggaaagac
tataggagcaacttgaaagaagaatggccttcaactcttttggtcagtcttattgatcac
tatggaggtaataactttagccaagaaaagatcatgagaggtaatgctaaacaactggga
aggagtccaggctcagaagctagagaatttgaaactgaggctcatgccatccttgaatca
gttgcggcagagcttcatgcactctcttggatgaccttgagtccagcatacctggacagg
cgaactgccctgcctttccattgtgatatggttttgagactcaggaggcttcttcatttt
gctgataaggagctctccaagcatcctgagaaggcacaaagtgtgggttaa
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