Fragaria vesca (woodland strawberry): 101297624
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Entry
101297624 CDS
T02666
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101297624
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
101297624
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
101297624
NCBI-ProteinID:
XP_004295127
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Position
LG3:complement(26027731..26037837)
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AA seq
754 aa
AA seq
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MAEIMNMPVDSLDRRRDRKDKSSEEPPPPPQSSSPQQAPQQQPPPPPPSRRRDRDEKERD
RDLDRPPRRPDYYDRGNRSPPPPRERDRDRDYKRRGSVSPPPPYRDRGRHSPPRRSPPPP
LKRSRREDGGYDGRRGSPRGGFGPGGDRRSGYDYASGYDREMGVRPGYGDDRPHGRYAGR
SSGGYGPSDWDSGRAGFGDASSTGTTQREGLMSYKQFIQELEDDILPAEAERRYQEYKAE
YISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNEISQKTAKEFLLELQSGSLDLGPG
VNSSAPNKSGHTSEPNSDDEADVDGKRRRHGRELNKENDLISTAPKAHPVSSDPRRIQVD
VEQAQALVRKLDSEKGIVENILCAPENDKMNREKSHGGSTGPVVIIRGLTSVKGLEGVEL
LDTLITYLWRIHGVDYYGMIESNDAKGLRHVRVEVKGSDIGNGAEWEKKLDLHWQERLHS
QDPLEVMTAKEKIEAAALQGLDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL
KHPELLVDVTVKMREDLYFQNYMNDAEAPGGTPVMQQSILRDKPQRRRPGMENRLKDERG
NRRERENRANGGERYDRSENMQQGEFPSNNDGQDGGNHDEPMYDNFGGQGMHGGPPFPSD
ITPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGPPPFEGSGRNMWPGPQMSGPAPIL
ALSPAFRQDPRRLRSYQDLDAPEDEVTVIDYRSL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatcatgaacatgccggtcgactccttggaccgccgtcgtgaccgcaaagac
aagtcctccgaagagcctcctcctcctcctcaatcctcctcgccgcaacaagcaccacaa
cagcagccgccgcctcctccgccctcgcgaagacgcgaccgcgacgaaaaggagcgagat
agggacctcgaccgcccgcctcgccgcccggactactacgaccggggaaatcgttcccct
ccgcctccgcgggagagagatagagatagggattacaagcggcggggcagcgttagtcca
ccacctccgtatagagaccgcggcaggcactcgccgcctcggaggtctccgccacctccg
ttaaagcggtccaggagggaagatggaggctacgacggccgcagagggagtcctagaggc
ggctttggacctggaggtgacaggaggtctggatatgattatgcaagtggatatgatagg
gagatgggggttagacctggttatggtgatgacaggcctcatggtcgttatgctggacgc
tcatctggtggctacgggccttctgactgggattcaggacgtgctggctttggtgatgct
tccagcactgggaccactcaaagagaaggtttgatgtcatacaaacaattcatccaagag
ctggaagatgacattttgccagctgaagctgagcgcagatatcaagagtacaaggcagag
tatatatccactcagaagcgagcatattttaatgctcataaagatgaggaatggctaaaa
gacaaatatcatcccacaaacctactcactgtaattgaaaggagaaatgaaatatcacag
aaaacagcgaaggaatttctgcttgaactgcaaagtggatccttggacttagggcctggt
gtcaattcctcagctccaaataaatctggacatactagtgaaccaaattctgatgatgag
gctgatgtggatggcaagagaagacggcatggcagggaactgaataaagaaaatgatctt
atatctactgctcctaaggctcacccagtcagttctgatcctagacgtatacaagttgac
gttgaacaagcacaagcccttgtccgcaaacttgactctgaaaaaggaattgtggagaac
atcttatgtgcacctgagaatgacaaaatgaacagagaaaaatctcatggtggttccact
ggccctgttgttatcatacggggtttgacatctgtcaagggccttgagggtgttgagctt
cttgacaccctcattacctacctttggcgcatacacggtgtagattattatgggatgatt
gagtcaaatgatgctaaaggtctcaggcacgtgagagtagaggtgaagggttccgacata
ggtaatggagctgagtgggaaaagaaattagacttgcattggcaagaaagattgcacagt
caagatccattggaagtaatgactgccaaggaaaagatagaagctgctgctttacaaggc
ctggatccctttgtgcggaagattagggatgaaaaatatggctggaagtatggttgtggt
gccaagggttgcactaagctctttcatgctgctgaatttgtgcacaaacatctcaagtta
aaacaccccgagctactggtggatgtgactgtgaaaatgcgcgaggatttatatttccag
aattacatgaatgatgcagaggcgcccggtggaactcctgttatgcagcaatcaatactg
agggacaagccacagagacgtaggccaggtatggagaatagattgaaagacgagcgtggt
aatcggagagaacgagaaaaccgagccaatggtggtgagaggtatgataggtctgagaat
atgcaacaaggtgaattcccatccaacaatgacggccaagatggaggaaatcatgatgag
ccaatgtatgataattttggtggacaaggaatgcatggtggtcctcctttcccatcagat
ataaccccaccacctgtgttgatgcctgtacctggtgctggtcctcttgggccttttgtt
cctgctccacctgaagttgcaatgcaaatgttgagagatcaaggtggtcctccacccttt
gaaggcagtggtagaaacatgtggcccggacctcaaatgagtgggccagccccaattctt
gctttgtccccagctttccgacaggatcctcgacgtttaagaagttaccaagatctagat
gcgcctgaggatgaagtcacagtgatagactacaggagcttgtag
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