Fragaria vesca (woodland strawberry): 101298334
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Entry
101298334 CDS
T02666
Name
(RefSeq) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101298334
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fve01007
]
101298334
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101298334
Enzymes [BR:
fve01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
101298334
Amino acid related enzymes [BR:
fve01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
101298334
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101298334
Prokaryotic type
101298334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Spc42p
YabA
eIF3_N
Motif
Other DBs
NCBI-GeneID:
101298334
NCBI-ProteinID:
XP_004302435
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All DBs
Position
LG6:complement(5282357..5285994)
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AA seq
447 aa
AA seq
DB search
MLDINLFREEKGGNPEIIRESQRRRFKSVEIVDEVIQLDKEWRQRQFELDSLRKEFNKIN
KKVAQLRISGQDATDVIKDTEENKKLTAEKEVEVREASNVVNSKLEGIGNLVHDSVPIHD
DEANNAVVRSWGEKRMEPKLKNHVELVELLGIADLKKGAEVAGGRGYYLKGAGVRLNQAL
INFGLDFLEKRGYTALQTPFFMRKDIMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAYHVDDWIHPSQLPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCMTSPNGQD
SWEMHEEMLKNSEEFYQQLKLPYHVVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCS
NCTDYQSRKLEIRFGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQREDGVEVPEVL
RNFMGGVAFLPFKNKPAPEVKGKKSKA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgttggacatcaatctcttcagagaagagaagggcggcaaccccgagatcatccgagag
tctcagcgccgtcgattcaaaagcgtcgagatcgtcgacgaggtcatccagctcgataaa
gaatggcgtcaacgtcaatttgagctcgatagtctcaggaaggagtttaacaagatcaac
aagaaggttgctcagctcaggatttcaggtcaggatgcaaccgatgtgattaaggacaca
gaagaaaacaagaagttgaccgcagaaaaagaagttgaagtgcgtgaggcttcaaacgtt
gtgaattcaaaattggaaggcattggaaaccttgtgcatgatagtgttcccatccatgat
gacgaggccaataatgctgtggttaggtcgtggggtgagaaacggatggagccaaaactc
aaaaatcacgttgagcttgttgagctactgggtattgctgacttgaagaaaggtgctgaa
gtagcaggaggtagaggttattacttgaaaggtgctggtgtccgcctcaatcaagctctg
attaattttggtcttgatttccttgagaaaaggggatacacggcattgcagactccattt
tttatgagaaaagatatcatggcaaagtgtgctcaattagcacaatttgatgaggagctt
tataaggtaactggagagggtgatgacaaatatctcattgctacagctgaacagccactt
tgtgcatatcatgtggacgactggattcatccctcacagctgcccataagatatgctgga
tattcatcttgtttccgcaaggaagctggttcacatggtcgagataccttgggaattttc
agagtacatcagtttgaaaaagttgaacagttctgtatgacaagcccaaatggccaggac
tcctgggaaatgcatgaggaaatgttgaagaactctgaggaattttatcagcagctcaaa
cttccttatcatgttgtgtccatcgtttctggtgctctgaatgatgcggcagcaaagaaa
tatgatctggaagcatggtttcctgcatctaagacgtacagagagctcgtctcatgctcg
aactgtacagactaccaatcaagaaagttagaaattcgatttgggcagaaaaagagcaat
gagcagacgaagcaatacgttcacttgttgaactccacccttacagcaactgagagaacc
atttgctgcattctagaaaattatcagagggaagatggtgtagaggtgccagaagtctta
cgaaacttcatgggtggagtggccttcctacctttcaagaacaaaccagcccctgaagtc
aaagggaagaaatcaaaggcctaa
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