Fragaria vesca (woodland strawberry): 101304818
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Entry
101304818 CDS
T02666
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101304818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101304818
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101304818
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
101304818
NCBI-ProteinID:
XP_011469067
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Position
LG7:complement(5727184..5731472)
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AA seq
630 aa
AA seq
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MNNKQANDAVAIELRNTDWNLELEPRDGGHKTTSTTKELEETLKKHDEPRNRWNTIFTIS
CAIAIFIDPLYCYAPVIHGKCLELHQTLMWTYIGLRSAVDVFYAIDLVTLLLGIGNKLGA
FWTRSNQKTVVSSKEEKKGLVSWCKKTFGTFCTRSSQKTMVLYLILVSLPLPEGLLLSSI
CSELLLYKWDPTYALIITTPIQYSLRIYHMYVSLRLRRPILKSEMGKWLKAVMDYLPFVL
ASHLFGALWYRLAVQRQIDCWKSHCEELLLLETKQCKSISSRLFFCKTMSSSKTSDLSKW
DELCHPVKEANPEVFDFGIYLHALQSNVTSSTNAIKRMSQSFWWALRNLSSFGSNLQTSL
YTMEIFLSVLISISGMALFLVYLNARVQESQKILDEFKSKKKTQLLKPDVDLWLYRNNIQ
QEDLKRAIMENIHELGENKDIDLQNMLFILPVNDKKRIIQFLCLDSLKKVPVLENIHENV
LIAICQHLKPVTYTEDSYIVQEGRPLGKMIFIMQGLAWTYTTSNIIGETIKKGDFYGEEV
LTWAFQSLSFSGLPISTRTVISQGKIEAFAIRADDLKSVVYKFWWHFRKEVGVSQLELWE
HLAASSIQTAWRLRNAKAKPPTKWDRIPYP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaagcaagccaatgatgcggtagcaattgagctacgaaatactgattggaat
ttggagttggaacccagagatggaggacataagactacaagtactacaaaagagctagaa
gaaactcttaaaaagcatgatgagccaagaaatagatggaatacaatctttacaatatca
tgtgcaattgcaatcttcattgatcctttgtactgttacgctcctgtgatccacggcaag
tgcttagaactgcaccaaactttgatgtggacgtatattggcttacgatcagccgtcgat
gtcttttacgcaatcgacttggttactttgttgctgggaatcggtaacaagcttggtgcc
ttctggactagaagtaaccaaaagacagttgttagttccaaagaggaaaagaagggtctt
gttagttggtgtaagaagacatttgggactttctgcactagaagtagccaaaagacaatg
gttctatatctcattttggtttctcttccccttccagagggactgttactctcttccata
tgctcggaattactgttatataaatgggatcctacttatgctcttataatcacaactcca
atccaatactccttacggatttatcacatgtacgtatccttgaggctgcgacgtcctatc
ttgaagtctgaaatgggaaaatggcttaaagctgtaatggattaccttcccttcgtcctt
gcttctcatctatttggagctttgtggtaccgtcttgctgttcagcgacagatagattgt
tggaagtcacattgtgaagagctcctcctgctagaaactaagcaatgtaaatctataagc
agtcgactttttttctgtaaaacgatgtcctcgtcgaaaaccagcgatctctctaaatgg
gatgaattatgtcatcccgttaaagaagcaaatccagaagtctttgatttcggtatatat
cttcatgctcttcagtctaatgtgacaagttcaacgaatgccataaaaagaatgtcgcaa
tctttttggtgggcgctacgaaatctgagttcctttggttcaaacctccagactagtctg
tatacaatggaaatcttcttgtctgtgttgatatctataagtggcatggcgttattttta
gtatatctgaatgcaagggtgcaggagtcacaaaagatactagacgagtttaaatcaaaa
aagaagacgcagttgctgaaaccagatgtagatctgtggttatatagaaataacattcaa
caagaggatttgaagagagccatcatggaaaacatacacgaacttggggaaaacaaagat
atcgatttgcaaaacatgctctttattcttcccgtaaatgataaaaaaagaatcatccag
tttctctgcttggattcactaaagaaagtgcctgtgcttgaaaatattcatgaaaatgtt
ctgatagcaatctgtcagcatcttaagccagtgacatacactgaagacagttatattgtt
caagaggggagaccacttggaaagatgatcttcatcatgcaaggccttgcttggacttac
acaaccagtaacataatcggcgaaacgataaagaaaggcgatttttacggagaagaagtt
ttaacttgggcgttccaatccctttccttttctggtttacccatctcaactcgaactgtt
atatcccaaggaaaaatcgaagcctttgctatcagagccgacgacttgaagagtgttgta
tataagttttggtggcattttaggaaagaggtaggtgtttcacagttggagctctgggag
catttggcagcgtcttccatacaaactgcttggcgcctccgtaatgcaaaggctaaaccc
ccaactaagtgggataggattccttatccctaa
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