Fragaria vesca (woodland strawberry): 101309228
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Entry
101309228 CDS
T02666
Name
(RefSeq) ruvB-like protein 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101309228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fve03036
]
101309228
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fve03037
]
101309228
Enzymes [BR:
fve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101309228
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
101309228
Chromatin remodeling factors
SRCAP complex
101309228
INO80 complex
101309228
INO80 complex (yeast)
101309228
SWR1 complex
101309228
ASTRA complex
101309228
Cilium and associated proteins [BR:
fve03037
]
Motile cilia and associated proteins
Dynein assembly factors
101309228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_5
AAA_19
Mg_chelatase
AAA_16
bpMoxR
AAA_18
AAA_25
Zeta_toxin
GvpD_P-loop
DnaB_C
AAA_11
AAA_28
AAA_7
TsaE
AAA_lid_2
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
101309228
NCBI-ProteinID:
XP_004294694
LinkDB
All DBs
Position
LG3:19890339..19895584
Genome browser
AA seq
458 aa
AA seq
DB search
MDKVKIEEVQSTTKKQRVATHTHIKGLGLEANGRAAPWAAGFVGQGEAREAAGLVVDMIR
QKKLAGKALLMAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFR
RAIGLRIKENKEVYEGEVTELTPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
DALVKEKVAVGDVIYIEANSGAVKRVGRSDAFATEFDLEAEEYVPLPKGEVHKKKEIVQD
VTLHDLDAANARPQGGQDILSLMGQMMKPRKTEITDKLRQEINKVVNRYIDEGVAELVPG
VLFIDEVHMLDMECFSYLNRALESSLSPIVIFATNRGICNVRGTDMASPHGIPVDLLDRL
VIIRTQTYGPEEMIKILATRAQVEELVVDEESLAYLGEIGQRTSLRHAVQLLSPASIMAK
MNGRDNICKEDLEEVATLYLDAKSSAKVLQEQQEKYIS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggataaggtgaaaatagaagaggttcagtccactaccaagaagcaacgcgtagctact
cacacccacattaaaggccttggtcttgaggccaatggaagagcagcaccttgggctgct
ggctttgtgggtcagggggaggcaagagaagctgctggtcttgttgtcgatatgatacgg
cagaagaagttggctggtaaggctcttctaatggctggacctcctggaactggaaagaca
gcactggctcttggaatatcccaggagcttgggagtaaggttccattctgcccaatggtt
gggtctgaagtatattcatcagaagttaagaaaacagaggttttaatggaaaattttaga
cgggctattggtctacgtatcaaggaaaacaaagaggtctatgaaggagaggtgacagaa
ctaacaccagaagaaacggagagtgtgacgggtggctatggtaaaagtatcagccatgta
atcattggattaaaaactgtcaaaggaaccaagcaattgaagttggaccctactatttat
gacgcattggttaaggaaaaggttgctgttggtgatgttatatacattgaagcaaacagt
ggggcagtaaaaagggtaggcagaagtgatgcatttgctacggaattcgatcttgaagca
gaagagtatgttccacttccgaaaggagaggttcacaaaaagaaggagattgtgcaggat
gtaactctgcacgatctagatgctgcgaatgcacgacctcaaggtgggcaagacatatta
tctctaatgggtcagatgatgaaaccaagaaaaacagaaattacggacaagttgcgacaa
gaaataaacaaggttgttaaccggtatattgatgaaggtgtagcggagcttgttcctgga
gttctgttcattgatgaggtacatatgctggatatggagtgcttctcgtacttgaatcgt
gctttagagagctcgttatctccaatagtaatatttgccacaaataggggaatttgcaac
gtgagagggactgatatggctagtcctcatggaatacctgttgacttgttggaccggttg
gtgattatccgaacacagacatatggtcctgaagagatgataaagatattagcaacccgc
gcacaggtggaggaactggttgtagatgaggagagtttggcttaccttggggagatagga
cagcgaacgtctttaaggcatgctgttcagctcttatcccctgcaagcattatggcaaaa
atgaatggcagagataatatctgcaaggaggatttggaagaagtagctaccctatatctg
gatgcaaagtcttcagcaaaggttcttcaagagcagcaggaaaaatacatttcgtaa
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