Fragaria vesca (woodland strawberry): 101311924
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Entry
101311924 CDS
T02666
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03082
ATP-dependent chromatin remodeling
fve03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101311924
03083 Polycomb repressive complex
101311924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fve03036
]
101311924
Enzymes [BR:
fve01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101311924
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
101311924
HDAC complexes
Sin3A-HDAC complex
101311924
BRAF-HDAC complex
101311924
REST complex
101311924
SHIP complex
101311924
MiDAC complex
101311924
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
101311924
Heterochromatin formation proteins
Other heterochromatin formation proteins
101311924
Chromatin remodeling factors
NuRD complex
101311924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
101311924
NCBI-ProteinID:
XP_004290100
LinkDB
All DBs
Position
LG2:8294096..8298127
Genome browser
AA seq
495 aa
AA seq
DB search
MDTGGNSLASGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPYPARDRDLCRFHADDYVAFLRNITPESQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGICDISINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYHYLFKPLIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGAEIEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSHQLLEEIRSKLLENLSRLQHAPSVQFHERPPENEIPEEDEDQEDRDERWDADSDMEL
DNERKPLPPSRVKKEIVEPEVKDPKGAAENSRAYDDAGLDEITTSAKALDMGSGSMEEPS
VKVEQESLNKPADQM
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggcggcaactcgctggcgtcaggccccgacggcgtgaagcgcaaagtgagt
tacttctacgacccagaagtcggaaattactattatggacaaggccacccgatgaagccc
caccgcatcagaatgacccacgccctcttagcccactatggtcttctccagcacatgcag
gttctcaaaccctacccggcccgggaccgagacctctgccgcttccacgccgacgattac
gtggcgtttctccggaatattacccctgaatcgcagcaggaccagcttaggcagttgaag
aggtttaatgttggggaggattgtcctgttttcgatgggttgtattcgttttgtcagact
tatgccggtgggtctgttggtggggctgtcaagctcaaccatgggatttgtgacatttcg
attaattgggctggtgggttgcatcatgctaagaagtgtgaggcttccgggttttgttat
gtcaatgacattgtgcttgcaatcttggagcttcttaaacaacatgagagagttttgtat
gtggacattgatatccaccacggagacggtgttgaggaggcgttttacacaacagacagg
gtcatgacggtttcgtttcataaatttggagactatttcccggggacgggggatattcgc
gatattgggtacggaaaaggaaagtattactcactgaatgttccgttggatgatgggatt
gatgacgagagctaccattacttgttcaaacccctgattgggaaggttatggagattttt
aggcctggtgctgttgttctacagtgtggcgctgattccttatctggggataggcttggt
tgctttaatctttcaatcaagggtcatgctgaatgtgttaaatacatgagatccttcaat
gtccccctcttgcttctagggggtggtggctatactatccgtaatgttgctcgttgctgg
tgctacgagacaggggttgctcttggagcagaaattgaggacaaaatgccacaacatgag
tattacgagtattttggtccagactatactcttcatgttgcccctagtaacatggaaaac
aagaattctcatcagttgctggaagaaatacgatcaaaacttcttgagaacctctccagg
cttcagcatgcacctagtgtccaatttcatgaaaggcctcctgaaaatgagattccagag
gaagatgaggatcaggaggacagagatgagagatgggatgccgattcggacatggagctt
gataacgaacgaaaacctttaccaccaagcagagtaaagaaagaaattgttgaacctgag
gttaaagacccgaaaggagccgcggagaactctcgagcctatgatgatgctggactggat
gagattacaacaagcgcaaaggctttggatatgggctctgggtctatggaagaaccaagt
gtgaaagtggaacaagagtctctaaataagcctgcggatcagatgtaa
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integrated database retrieval system