KEGG   Gossypium arboreum (tree cotton): 108456704
Entry
108456704         CDS       T05776                                 
Name
(RefSeq) rRNA biogenesis protein RRP5
  KO
K14792  rRNA biogenesis protein RRP5
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gab03009]
    108456704
Ribosome biogenesis [BR:gab03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    108456704
SSDB
Motif
Pfam: S1 Spt6_S1 Suf NRDE-2
Other DBs
NCBI-GeneID: 108456704
NCBI-ProteinID: XP_017610800
LinkDB
Position
11:complement(74767836..74787059)
AA seq 1928 aa
MAASSKKFQKKKSNEGKRKFNKASKKQFKTKKDGAVKSEAVALQLEDDVPDFPRGGGSSL
SKHERDEIRAEVDAEFEAEELASKKNKRKKSQKKIQAMPDDLGSLFGDGITGKLPRYANK
ITLKNISPGMKLWGVVAEVNEKDLVISLPGGLRGLVRAGDALDPVVSNKVENNEGDFLKN
IFYPGQLVSCIVLQLDDDKKETGKRKIWLSLRLSFLHKGFTLDAVQEGMVLTGYVISIED
HGYMLHFGLSSFTGFLRKDGHAESKDVEVRTGQFLQGVIKSIDKTRKVVNLSSDPDTVSK
CVTKDLKGISIDLLIPGMLINASVRSTLENGIMLSFLTYFTGTVDTCHLQNKFPNKNWKD
DYNQNKKVNARILFIDPSTRAVGLTLNPHLVHNKAPPLHVNIGDIFDQSKVVRVDRGFGL
LLEIPSKPVSTPAYVNVSDVAEEEVRKLEKKFKEGTQVRVRILGFRHLEGLATGILKASA
FEGPVFTHSDVKPGMVVKAKVTSLDSFGAIVQFPGGVKALCPTRHLSEFEIAKPGKKFKV
GAELVFRVLGCKSKRITVTYKKTLVKSKLGIISSYAEATEGLVTHGWITKIEKHGFFVRF
YNGVQGFAPRSELGLGPGDDPNSMYHVGQVVKCRVTGSSPASRHINLSLQMRPVRISEDD
MVKLGSIVSGVVEGLTPSAVVINVNSKAHLKGMISNEHLADHHERAALLKSILKPGYKFD
QLLVLDIEGNNIVLSAKFSLISSAEQLPSDNSQIRPNTVVHGYVCNLIETGCFVRFLGRL
TGFSPRSKAMDDHKADLSGAFYIGQSVRCNIVDVNSETARITLSLKQSCCSSTDATFIQE
YFILEEKIARLQSLGSDGSELKWIEGFNIGSVIEAKIGEAKDIGVVVSFDKYNDVLGFIT
HSQLGGLSLETGSVVQAAVLDVDKAERLVDLSLKPEFVEKSQEGSSKSQPHKKKRKREAS
KALELHQTVNAVVEIVKEHYLVIAIPEYNHAIGYASIADYNTQKLPQKQFLNGQRVIATV
MALPSPETSGRLLLLLNSIGEVTETSCSKRAKKKSSYNVGSLVPAEVTEIMPLELRLKFG
IGFCGRVHITEVNDNNVLEKPFGNFKVGQTITARIVGKPNQKGHLWDLSIKPAMLADAGE
IGVKTALEEFDFSTGQLVTGYVYKVDSEWAWLTISRHVKARLFILDTGCEPNELQQFQER
FKVGKPVSGHILNVNKDKKLLQIVRHPLGALSTRNVGDEDKRKGESGNNISDESVTAHIH
EGDILGGRISKILPGIGGLVVQIGPNNYGRVHFTELKDAWESDPLSGYHEGQFVKCKVLE
VSHSTKGTIHIDLSLRLSLDGLIPKNPLELASDVDSTSKRAEKVEDLYPNMAVQGYVKNV
IPKGCFIMLSRKVDAKILMSNLSNGYVNDPKKEFPIGKLVSGRVLAVEPLSKRVEVTLKN
SDTKGTSKSEINDFSRLHVGDIVSGRIRRVESYGLFITLDHTNMVGLCHFSELSDDHIEN
IQTNYAAGEKVKAKILKLDEERHRISLGMKNSYFTDDIDFQITEQEESDEDIEETGVADD
DADDEARSILLTDSTGMDIEYGSGVSDVLAQAESRASIPPLDVTLDDIEHSDMENFISQN
QENNEVTAVDEKSKRRAKKKAKEEREREIRAAEERQLEKDIPRTTDEFEKLVRSSPNSSF
VWIKYMAFMLNSADIEKARAIAERALRTINIREETEKLNIWVAYFNLENQYGNPPEEAVQ
KVFQRALQYCDPKKVHFALLGMYERTEQHKLAEELLDKMSKKFKHSCKLWLRRVQMLLMQ
QQDRVQPVVNRALLCLPHHKHVKFISQAAILEFKSGVPDRGRSMFEGVLREYPKRTDLWS
IYLDQEIRLGDEDVIRALFERAISLSLPPKKMKFLFKKYLNYEKSCGDEARIESVKRKAM
DYVESTLT
NT seq 5787 nt   +upstreamnt  +downstreamnt
atggcagcgtcttcaaagaaatttcagaagaaaaaatccaatgaagggaaacggaagttc
aataaagcgtccaagaaacagttcaaaacgaagaaggacggtgccgttaagtctgaggct
gtagctttgcaacttgaagacgatgtccccgacttccccagaggcggggggagttccttg
agcaaacacgaacgtgatgaaattcgagcagaagtggatgcggagtttgaggcagaggag
ctggcatcaaagaagaataagaggaagaaatcgcagaagaaaatccaggctatgccggat
gacttgggttccttgtttggtgatggcattactggcaaactacctagatacgcaaataaa
ataactttaaagaatatttctcctggaatgaagctctggggagttgttgctgaagtaaat
gagaaggatcttgtaattagtcttccaggcggcttacgtggtttagttcgtgctggtgat
gctcttgatcctgttgtcagtaataaagttgagaacaatgaaggggatttcctcaaaaat
atattctaccctgggcagctggtttcttgcattgtgctgcagttggatgatgataagaag
gagactggcaaaagaaaaatatggctttccttgcgtctctcttttttgcacaaaggcttc
accttggatgctgttcaagaggggatggttctcactggatacgttataagcattgaagat
catggttacatgcttcactttggactatcgtcattcacggggtttttacgaaaagatggc
catgctgaaagcaaggacgttgaagtgaggactggacagtttttacaaggggttattaag
agcattgataaaactcgcaaagttgttaatttgagttctgacccagataccgtgtctaaa
tgtgtaaccaaggatcttaagggcatctcaattgatcttcttatccctggcatgttgatt
aatgcttcggtgcggtcaacccttgagaatggtatcatgttatcatttctgacatacttt
actggaacagttgatacgtgtcatttacaaaataaattccctaataagaactggaaggat
gactacaaccaaaataagaaggttaatgctcggatattgtttattgatccctcaactaga
gcagttggcttgaccctgaatcctcatcttgttcataacaaagctcctccattgcatgtt
aacattggagatatttttgatcagtcaaaagtggtcagggtcgatagagggttcggtctt
ctgctcgaaatcccttctaaaccagtgtcaactccagcctatgtgaatgtatctgatgtg
gctgaagaggaagtccgcaagctagaaaaaaagtttaaggaaggcactcaagttcgtgtt
cgaattcttgggttccgacacttggaagggcttgccactggtattttaaaggccagtgca
tttgaaggaccagttttcactcactcagatgtgaaacctgggatggtggtaaaagctaaa
gtcacttcacttgacagctttggtgccattgtgcaatttcctggtggtgtgaaggcacta
tgtcccacacggcacttgtctgaatttgaaattgcaaaacctggaaagaagtttaaggtt
ggagctgaattagtcttccgggtgctcggttgcaagtctaagagaataactgtcacttac
aagaaaactctcgtgaaatcgaaacttggtattattagttcttatgctgaagcaactgag
ggactagtaactcatggatggataactaaaattgaaaagcatggattctttgtccggttt
tacaatggagtccaaggatttgcacctagatccgaacttggcttaggaccaggagatgat
ccaaattcaatgtatcatgtgggacaagttgttaaatgcagagtaaccggttcttcacct
gcttcaaggcatatcaatcttagtttgcagatgaggcccgtgaggatttctgaagacgat
atggtcaagttgggtagcatagtttctggggttgttgagggtttaactccctctgcagta
gttataaatgttaactcgaaagctcacttgaagggtatgatatctaatgaacatttggca
gatcatcatgaacgtgctgccttgttgaaatcaatcctgaagcctggatataagtttgat
caactgctggttctagatattgagggcaataatattgtactctctgcaaaattctctctc
ataagttcggctgaacaactgccttctgataacagtcagatccgacctaacacagtggtt
catggctatgtttgtaatttaattgaaactggctgctttgtccgctttcttgggcgtttg
actggtttctcacctcgaagcaaggcaatggatgaccataaggctgatctctctggagcc
ttttacattggccaatctgttcgctgtaatatagtcgatgtaaatagtgaaacagcaaga
ataacactttctttgaagcaatcatgttgttcttcaacagatgcaacgtttattcaagaa
tactttattttagaggagaagattgctaggctgcaatcactgggctctgatggatctgag
ttgaagtggattgaaggatttaatattggcagtgtcattgaggcaaaaattggagaggca
aaggatattggagtagttgtcagctttgacaaatataacgatgttttaggctttatcaca
cattctcaattaggtggactttctttagaaactggatctgttgtacaagctgcagttctt
gatgttgacaaggcagaacgccttgttgatttatccttgaaacctgaatttgttgagaaa
tcacaagagggaagctctaaaagccaaccacacaaaaagaaacgcaaaagagaagcttcc
aaggccttggagctgcaccaaacagtaaatgctgttgtggagattgtgaaagaacattac
ttggttattgcaattcctgagtataaccatgccatagggtatgcatcaatagcagattac
aatacacagaagcttccgcagaaacaatttttgaatgggcagagggttattgcaactgtt
atggctcttccgagtcctgaaacgtcaggaaggttgcttttactccttaattcaattggt
gaggtcactgagacatcctgttcaaaacgggccaaaaagaagtctagttataatgtggga
tcattggttccagcagaggttactgaaataatgccccttgagttgagattgaaatttgga
attggtttctgtggacgggttcatataacagaggtaaatgataataatgttcttgaaaag
ccatttgggaacttcaaagttgggcagacaatcactgcaaggattgtcggaaagcctaat
cagaagggacacctatgggatttgtctattaaacccgccatgcttgctgatgctggtgaa
ataggtgttaagactgcactggaagagtttgatttttcaactggacaacttgtcactggt
tatgtctacaaagtggacagtgaatgggcgtggttaaccatttctcgtcatgtgaaagct
cgactatttattcttgataccggatgtgaacctaatgaacttcagcaattccaggagcgc
tttaaagttggaaagcctgtttctggtcacattttaaatgttaacaaggacaaaaagctg
ttacaaatagtgcgacatcctctaggtgccctttctactaggaatgttggtgatgaagat
aaaagaaaaggtgaatcaggtaataacatttcagatgagagtgtgacagctcatatacat
gaaggagacattctaggtggtagaatttccaaaatacttccaggtataggaggactggtt
gtgcaaattggtcctaataattatggtagggttcactttactgaactgaaggatgcatgg
gaatcagacccactatctggatatcatgaggggcaattcgttaagtgcaaagtcctagaa
gtgagccactcaaccaagggaactattcacattgatttatccttacggctatctttggat
ggcctgattcccaagaatcctttggaacttgcgagtgatgtggattctacaagcaagcgt
gcagaaaaagttgaggatctttatcccaatatggctgtacagggttatgttaaaaatgtt
attccaaaaggatgcttcattatgctttcaaggaaggtagatgcaaaaatcctcatgtca
aatttatctaatggctatgttaatgacccgaaaaaggaatttcccataggaaagcttgta
tctggaagggtattagcagttgagcctttgtcaaagcgagtagaagttaccttgaaaaat
tcagatactaagggcacttcaaaatctgaaattaatgattttagtagactgcacgttgga
gatatagtttcaggcaggatcaggcgtgtggagtcatatggtttgtttatcacacttgac
cacacaaacatggttggactttgccatttctctgagctttcagatgatcacattgagaac
atccaaactaactatgctgcaggggagaaggttaaagcgaagatattaaagttggatgag
gaaagacaccggatttcccttggcatgaaaaattcatattttaccgatgatattgacttc
caaataactgaacaagaagagtctgatgaagacattgaagagactggtgtagcagatgat
gatgcggatgatgaggcacggtcaatactgttgacagacagcactgggatggatatcgag
tacggaagtggagtgagtgatgttcttgctcaagcagaatctagagcttcaattcctcca
cttgatgtcactcttgatgacattgaacactctgacatggaaaattttattagtcaaaat
caagaaaataatgaggttaccgccgttgatgagaagagcaagagacgggcaaaaaaaaaa
gcaaaggaagagagggagagagaaattagagctgctgaggaaagacaattggagaaggat
ataccaagaactactgatgaattcgagaaacttgttaggagctctcctaatagtagtttt
gtgtggattaaatacatggctttcatgcttaattcagctgatatcgagaaagctcgtgct
attgctgaaagggctttgagaaccattaacattcgagaagaaacagagaagctaaatatc
tgggtggcttactttaatttggagaatcagtatgggaatcctccagaggaagctgtgcaa
aaagtatttcaaagggcattgcagtattgtgatcccaaaaaggtacattttgcacttttg
ggcatgtatgagaggacagagcaacataaattggccgaagagctacttgacaaaatgagc
aagaagtttaagcactcgtgcaagctttggttgagacgggtgcagatgctgttgatgcaa
cagcaggatcgggttcaacctgttgttaaccgtgctttactctgccttccacaccataag
cacgttaagtttatttcacaggcagctatacttgagttcaaatctggggttcctgataga
gggagatctatgtttgagggagttttacgagagtacccaaagagaacggatttgtggagc
atttatcttgatcaagaaattcgacttggagatgaagatgtgattcgtgctctgtttgag
agggcaattagtttgagcttaccacccaaaaagatgaagtttttattcaaaaagtatctc
aattacgaaaagtcctgtggtgatgaggcaagaattgaatctgtcaaacggaaggcaatg
gattacgtagaaagtactctaacttga

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