Gossypium arboreum (tree cotton): 108467315
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Entry
108467315 CDS
T05776
Name
(RefSeq) mRNA-capping enzyme
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108467315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108467315
Enzymes [BR:
gab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
108467315
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
108467315
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
108467315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
DNA_ligase_A_M
Y_phosphatase2
Y_phosphatase
Y_phosphatase3
YafO_toxin
Mitoc_L55
F_actin_bind
Motif
Other DBs
NCBI-GeneID:
108467315
NCBI-ProteinID:
XP_017623429
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All DBs
Position
2:69939811..69947769
Genome browser
AA seq
681 aa
AA seq
DB search
MIVGMDLNAFPLPEDDEDPYETQIEHYSAPEEHVESAVEISRREREERRKRLRSDRPDDR
PVHISQPVVYDHFYQNRNSTFYDKSRIPPGWLDCPAVGKEIGCIIPSKVPLGESYNDCVP
PGKRYSFKQAVHKQEVLGRKLGLVIDLTNTSRYYQTTDLKKKGIKHVKIQCRGRDAVPEN
ASVNTFVYEVSQFLLRQKSNKYILVHCTHGHNRTGYMIIHYLMRTQPMSVTQAIKFFSEA
RPPGIYKPDYIDALYAFYHERRPESLVCPPTPEWKRSSDLDLNGEAAADDDDDDGAPTAL
PENHETDVMLTNDDVLGDEIPHDQQVQMRQFCYQQLKLNTGVRGHAQFPGSHPVSLNRDN
LQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRSFNIRRVQMRFPCWHNKGVGGMNHHL
TLLDGEMIIDTLPDSRKQERRYLIYDMMVLNNEPIIERPFYERWKMLEKEVIEPRNYERH
NIYQSRNPYYRFDLEPFRVRRKDFWLLSTVNKVLKEFIPKLSHEADGLIFQGWDDPYVPR
THEGLLKWKYAQLNSVDFLFEIGSDDREQLFLHERGRKKLMEGNTAEFREVSDPPSSFSG
KIIECSWDPDRQVWVYMRIRTDKSTPNDINTYRKVMQSINDNITEEILLNEINEIIRLPM
YADRIRMDSKAHLHTNSARRR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgattgttggtatggacctaaatgctttcccattacctgaagatgatgaagatccatat
gaaacacagatagaacattactctgctccagaagagcatgtagaatctgcagttgaaatt
tcacggcgggaacgcgaagagagacggaagagattgagaagtgaccgaccagatgaccgg
ccagtacatatctctcagcctgttgtatatgatcacttctatcaaaataggaactcaaca
ttttatgataaaagcaggatccctcctggttggttggattgtcctgcggttggtaaggaa
ataggctgcatcattccttcgaaggttccacttggtgaatcttataatgactgtgttcct
cctggtaaaagatactcttttaaacaagcggttcataagcaagaagttttaggaagaaag
cttggtttggtgattgatttgacgaacacttctcgttactatcaaactacagacctgaag
aaaaaaggcattaagcatgtaaagatacaatgtaggggaagggatgctgtacctgagaat
gcgtctgtaaatacctttgtttatgaggtgtcacaatttctcctacgtcagaaatcgaat
aaatatattcttgtccattgtactcatggtcataaccgcactggctacatgattattcac
tatctcatgcgaacacagccaatgtctgttactcaggcaataaaatttttttctgaggca
cgcccaccaggaatatataaaccagactatattgatgccctgtatgcattttatcatgaa
agaagaccagaatctcttgtctgccctccaactcctgagtggaaaagatcttctgatctt
gatctcaacggtgaagcagctgcagatgatgatgatgatgatggagctccaactgcatta
cctgagaatcatgaaactgatgtaatgttgacaaatgatgacgttttgggtgatgaaata
cctcatgaccagcaggtacaaatgaggcaattctgctatcaacaattgaagttaaatact
ggggttagagggcatgcacaattcccgggatcacatccagtttcgctgaacagggacaat
ttacaacttttaaggcaacgctattattatgccacttggaaagcagatggaacacgatat
atgatgttaataactattgatggatgttacttaattgatagaagttttaatatccgaagg
gttcagatgaggtttccatgctggcacaataaaggtgtaggtggcatgaatcatcatttg
acattgcttgatggggaaatgataattgacaccctgccagactcacggaagcaagagaga
agatatctcatctatgatatgatggttcttaacaatgaacctattatagagcggccattc
tatgaacgatggaaaatgctggaaaaagaagtgattgagcctcgaaattatgaacgccac
aatatttaccagagcaggaatccttattaccgatttgaccttgaacccttcagggtgcgg
aggaaggacttttggttgctttctactgtaaataaggttttgaaagagtttatccccaag
ctctctcacgaggcagatggtcttatttttcagggttgggatgatccttatgtacctcgc
actcatgaaggtcttttgaagtggaaatatgctcagttgaactctgttgactttctattt
gagattggaagcgatgatcgtgaacaactttttctccatgaacggggaagaaagaagttg
atggaagggaatactgcagaattcagagaggtttcagatcctccttcatcgttctctggg
aagattatcgagtgttcttgggatcctgatcgacaagtgtgggtctatatgaggatcagg
acagataagtcgactcccaatgatattaatacttacaggaaggttatgcaaagtataaac
gacaatatcacagaagaaatcttattaaacgagatcaacgagatcattcgcttgcccatg
tatgctgatagaataaggatggacagcaaggcccacctgcatacaaattcagcacgacgg
aggtga
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