Gossypium arboreum (tree cotton): 108467464
Help
Entry
108467464 CDS
T05776
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108467464
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108467464
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
108467464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
RQC
ResIII
Osmo_CC
Motif
Other DBs
NCBI-GeneID:
108467464
NCBI-ProteinID:
XP_017623568
LinkDB
All DBs
Position
3:complement(40172138..40181662)
Genome browser
AA seq
711 aa
AA seq
DB search
MEADEIAEELQNIEFEIHDVEEQIRELIKKQEKLYERRSELQVLLETCPIDVKVGSAPTN
VQAEDWSRSFDWDSQAEDIRFNVFGISSYRPNQREIINAVMSGRDVLVIMAAGGGKSLCY
QLPAILRQGIALVVSPLLSLIQDQVMGLVASGIPAHMLTSTTSKEDEKFIYKALEKGEED
LKLLYVTPEKVSKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKT
QFPNVPVVALTATATMKVQNDLIEMLHIPKCVKFVSTVNRPNLFYMVREKSSVGKIVVDE
IAKYIKESYPNKESGIVYCFSRKECEQVASELCERGISADYYHADMDVNAREKVHMRWSK
NKLQIIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLFFRSAD
MPRQSSMVFHENSGLQNLYDIVQYCQSKRQCRRSAFFRHFAEPLQECNGMCDSCAFSSEI
KEVDASGHSKLLISLVREMQEKDQRVTMLQLVDRVKNKQKQLDFELKREEMEQLVVQLIL
DRVLKEEFQHTAYATNSYVTVGPRANQVLQGKKIIKMDVTSTSKDVDGYRKSSKHGVTSG
LEFKLDELRKELASHDKEIFPHSVLSGQQISSISAHLPNSIEELEKIIGKLKTEKYGGRI
LEEVKKYGNAEHPNNEVLNEEESSEIRPPRKKLKKANKQVIMVDSSNDESD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagacgagatagcagaggagctgcaaaacattgagtttgagattcatgatgtt
gaagaacaaatacgggagttaattaagaagcaagagaagttgtacgagagacggtcggaa
ctgcaagttttactggaaacatgtcctatagatgtcaaagttggctccgctccgaccaac
gtacaagcggaagattggtcaaggtcatttgactgggattctcaagccgaagatattagg
ttcaatgttttcggcatatcttcgtatcgtccaaatcaacgagagatcataaatgcagtg
atgagtggaagagatgttctggtgataatggctgcaggtggtggcaaaagcctttgctac
cagctccctgccatacttcgtcaaggaattgctcttgttgttagtcctttgctctcttta
atacaggatcaggtaatgggtttggttgcctcaggcattccagcacatatgctcacatcc
accacaagtaaggaagatgagaagttcatatacaaggccctcgagaaaggtgaagaagac
ctaaaattattatatgtcacacctgagaaagtatccaaaagcaagagatttatgtctaag
cttgaaaaatgccatcatgctggtcgcctctctcttatttccatcgatgaggctcattgt
tgtagtcagtggggtcacgattttcgccctgactacaaaaatcttggcatactaaaaact
cagtttccaaatgttcctgtagtggctttaacagcaactgccacaatgaaagtccaaaat
gatctgattgagatgctgcatattccaaaatgcgtaaagtttgtcagcactgtcaaccgg
ccaaatcttttttatatggtccgagagaagtcatctgttggaaagattgttgttgatgaa
atagctaaatacataaaggaatcctatccaaataaggaatctggcatagtttattgcttt
tccagaaaggaatgtgagcaggttgcaagtgagttatgtgagaggggaatatctgctgat
tattaccatgctgacatggatgtaaatgctcgtgagaaagttcacatgcgatggagcaaa
aacaaattgcagatcattgttggtacagttgcatttggaatgggaatcaacaaacctgat
gtcaggtttgtcatccatcatagcttgagtaaatcaatggaaacatattaccaggaaagt
ggccgagctggaagagatggactcccctctgagtgtctactctttttcaggtcggctgac
atgcctagacagagctccatggtcttccatgaaaactctggattgcagaacctttatgac
atagtacaatattgtcagtctaaaagacaatgtcgccgaagtgcctttttccggcatttt
gctgagccattgcaagagtgcaatgggatgtgtgacagctgtgcattctcaagtgagatt
aaagaagtggatgcttcaggtcattcaaaacttttgatttctctggtgcgtgagatgcaa
gagaaagatcaaagagtgacaatgttgcaattggtggacagagtgaaaaataagcaaaag
caactagattttgaactaaagagggaagagatggaacagcttgtagtacagcttatacta
gatcgtgttttgaaggaagaatttcagcatacagcctatgctacaaattcttatgttaca
gtaggaccaagagcaaaccaagttttgcaagggaaaaaaatcattaagatggatgtcact
agcacatcgaaggatgtggatggctataggaaatccagtaaacatggtgtcacatcggga
ttggagttcaagctagatgagctgaggaaggaactcgcttctcatgacaaggaaatattc
cctcattctgtgttgtcaggccaacagatcagcagcataagcgcccatttaccaaattca
attgaagagttggaaaagattattggaaagttgaagacagagaagtatggggggagaatt
cttgaagaagtaaaaaagtatggtaatgcagagcatccaaataatgaagtgttgaatgaa
gaagaaagcagtgaaataagacctcctagaaagaagctgaagaaggccaacaaacaagtt
attatggttgacagcagcaatgatgaatctgattga
DBGET
integrated database retrieval system
