Gossypium arboreum (tree cotton): 108476409
Help
Entry
108476409 CDS
T05776
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00740
Riboflavin metabolism
gab00790
Folate biosynthesis
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
gab01240
Biosynthesis of cofactors
Module
gab_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
108476409
00790 Folate biosynthesis
108476409
Enzymes [BR:
gab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
108476409
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
108476409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
108476409
NCBI-ProteinID:
XP_017634114
LinkDB
All DBs
Position
5:19397872..19402547
Genome browser
AA seq
562 aa
AA seq
DB search
MASFNVSSPSTADLSRLQSSKSFKFFNGLHSTNLFLTNGCLPDLALTRLDSRSSFVIKSG
GKTRAALVSGEGNILSYSNGNNATTNGTLFHDKSVGIEAQQDAIAFGTLAADAASTSNGF
PIDNDDSDLDRPTEGFASILEAIEDIRQGKMVLVVDDEDRENEGDLIMAAELATPEAMAF
IVKHGTGIVCVSMLEEDLERLQLPLMVNQRENEEKLRTAFTVTVDAKHGTTTGVSAHDRA
TTVLALASRESKPEDFNRPGHIFPLKYREGGVLKRAGHTEASIDLAVLAGLDPVAVLCEV
VDDDGSMARLPKLRQFAERENLKIISIADLIRYRRKRDKLIELAGAARIPTMWGPFTAHC
YRSILDGIEHIAMVKGEIGDGQNILVRVHSECLTGDIFGSARCDCGNQLGLAMKQIEAAG
RGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANVELGLPVDSREYGIGAQILRDLG
VRTMKLMTNNPAKYSGLKGYGLTIASRVPLLTPITRENKRYLETKRAKLGHVYGLDFNGS
LNSLIIGGNGNTVAPTDAASES
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcaacgtatcttctccttcaactgcagatctttctcgtcttcagtcatcc
aaaagtttcaaattctttaatggattgcacagcacaaatctattcttaacaaatggctgc
ttacctgatttggccttgacgcggttggatagtagatcatcctttgttattaaaagtggt
ggcaaaactagagctgcacttgtatctggagaaggcaacatcctgtcttattcgaatggc
aataatgctacaacaaatggtaccctcttccatgataaatcggtagggattgaagcacaa
caagatgcaatagcatttggaactcttgcggccgatgctgcttctacaagtaatggcttt
ccgattgataatgatgattctgatttggatcgtccaactgaaggttttgcttccatcctt
gaggcaatcgaggacattcgccagggcaagatggtattggttgtagatgatgaagacaga
gagaatgaaggagatcttataatggcagctgagttggcgacaccggaagcaatggccttt
attgtgaagcatggaactgggatcgtttgtgtgagcatgctagaggaagatctggagagg
ttgcagcttcctttgatggtgaaccaaagagaaaatgaagagaaactccgcactgcattc
acagttacagtggatgcaaaacatggtactacaactggtgtatcagctcatgatagagca
acaacggtattggcccttgcttctagagaatccaaacctgaggacttcaaccgaccgggt
cacattttcccactgaagtatagggaaggtggtgtcctaaaaagagctgggcatacagaa
gcttctattgatcttgcagtgctagctggactggaccctgttgcagttctctgtgaggtt
gtagatgatgatggatccatggctagattaccaaagcttcgccaatttgctgagcgggag
aacttgaaaattatatccatagctgatttaattaggtataggagaaagagggataaatta
attgagcttgctggtgctgcacggattccaactatgtgggggccattcaccgcccattgt
tacaggtcgatattggatgggattgagcatatagcaatggttaagggtgagattggagat
gggcaaaatattcttgtgagggttcactcggaatgcctcacgggagacatatttggatcc
gctagatgtgactgtgggaatcagcttggccttgcaatgaaacagattgaggctgctggc
agaggtgttttggtataccttcgtggacatgaaggcaggggaattggtttgggccacaag
cttcgtgcatataatcttcaggacgctggtcgtgacacagtcgaagcaaatgtggaactt
ggattgcccgttgattcaagagaatatggcattggcgcacagatactgagggatcttggc
gtgcgaacgatgaaactgatgactaacaatccggccaagtacagtggactcaagggttat
ggattaacaatagcaagcagggttccactactaactcctattacaagggagaataagaga
tacttggaaacaaaaagagctaaactgggtcacgtatatggcttagattttaacggcagt
ttgaacagtctcattatcggcggcaatggtaacacggttgctccgacggatgctgcatct
gaatcttag
DBGET
integrated database retrieval system
