KEGG   Gossypium arboreum (tree cotton): 108478195
Entry
108478195         CDS       T05776                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108478195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gab03400]
    108478195
Enzymes [BR:gab01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     108478195
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     108478195
 Prokaryotic type
     108478195
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 108478195
NCBI-ProteinID: XP_017636116
UniProt: A0A0B0N9N1
LinkDB
Position
6:119100321..119103667
AA seq 288 aa
MQKTCKRKQLRLDGRSQKTPKSTTEEPYPCHHRPTPEECRAVRDELLALHGFPREFLKYR
RHRLIKMEPFSNEAQSEPLINSDDGDDKEESVLDGLIKIVLSQNTTELNSQKAFASLKSV
FPTWEDVYAAETKSLENAIRCGGLAPRKASCIKNVLSCLHERKGKLCLEYLRDLSVDEIK
SELSNFKGVGPKTVACVLMFNLQRDDFPVDTHVFEIARAIGWVPAVADRNKTYFHLNRRI
PNELKFDLNCLLYTHGKLCRKCTMKGSSQKKLTSEDRSCPLCVNVVEG
NT seq 867 nt   +upstreamnt  +downstreamnt
atgcagaaaacctgcaaaagaaagcagcttcggctggatgggcggtcccagaaaacaccc
aaatcaaccactgaagagccatacccatgtcaccatagacccacccctgaagaatgtaga
gccgtaagagacgagctcttggctctccatggtttccctcgagaattcctcaagtaccgc
cgtcacaggctcatcaaaatggagcccttcagtaacgaagcacagtcagagccgttgatt
aacagtgatgatggggatgataaggaagaaagcgtgttggatggtctgatcaaaattgtg
ctctctcagaatactactgagcttaattcccaaaaggcttttgcttctctcaagtctgtt
tttcccacctgggaagatgtatatgctgctgaaaccaaaagtctagaaaatgcaataaga
tgtggcggcttagcaccaaggaaagcttcttgtattaagaatgtgttgagttgtctgcat
gagagaaaaggcaaactctgcttggagtacttacgagatttgtcggttgatgaaattaag
tctgagctctccaattttaaaggagttggccctaagacagtggcttgtgttttgatgttc
aatcttcagcgagatgatttcccagtggacacacatgtgtttgagattgctagggccatc
ggttgggtccctgctgtagcggacaggaataagacatactttcatctcaaccgtaggatc
ccaaacgaacttaagtttgatctgaactgtcttctgtatacacatggtaagctttgtcgc
aaatgcacgatgaaaggaagtagccagaaaaagttgacatccgaagatcgttcgtgtccc
ctatgtgtaaatgttgtggagggttaa

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