Gossypium arboreum (tree cotton): 108483733
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Entry
108483733 CDS
T05776
Name
(RefSeq) oligoribonuclease-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108483733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108483733
03009 Ribosome biogenesis [BR:
gab03009
]
108483733
Messenger RNA biogenesis [BR:
gab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
108483733
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-60S particles
RNases
108483733
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
108483733
NCBI-ProteinID:
XP_017642783
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All DBs
Position
7:121943916..121946119
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AA seq
235 aa
AA seq
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MDRLSNAFSLLDIDVDDHHPPPASSSASKPSGKSKNNGKGPTELKPALLSENYKLPLVWI
DLEMTGLNIETDRILEIACIITDGYLTKSLEGPDLVIHQSKECLDRMGEWCQNHHAASGL
TKKVLQSTISEREAEKQVIEFVKRHVGTYTPHLAGNSVYMDFIFLKKYMPDLASLFSHVV
VDVSSVRALCIRWYPRDQKKAPAKEKKHRAMDDIRESISELKYFKETIFKAKSKK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggataggctatcgaatgcgttttcgttgctggatattgatgtggacgatcatcatccc
ccaccggcttcatcatctgcttccaaaccttcaggtaagagcaaaaacaatgggaagggc
ccaactgaactgaaaccggcattgctttcggaaaactacaagttaccccttgtttggatt
gacttggaaatgactggtttgaatattgagactgatagaatattggagatagcttgtata
attacagatggctatctcaccaaatcattggagggtcctgatctggttatccatcaatct
aaagagtgtttagatagaatgggggaatggtgtcaaaatcatcatgcagctagtggattg
acaaagaaggtgctccaaagtacaattagtgaaagagaagctgaaaagcaggtcatagaa
tttgtaaagagacatgttggtacatacacacctcatttagctggaaattcagtttatatg
gattttatctttctgaagaaatatatgccagatttggctagccttttttctcatgtggta
gttgatgtaagcagtgtaagggctctttgcattcgctggtatccaagagatcaaaagaaa
gcccctgccaaagaaaagaaacacagagccatggatgatatcagagagagcatatccgaa
cttaaatacttcaaggagaccatatttaaagcaaaatccaagaagtga
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