Gossypium arboreum (tree cotton): 108484468
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Entry
108484468 CDS
T05776
Name
(RefSeq) probable polygalacturonase At1g80170 isoform X1
Organism
gab
Gossypium arboreum (tree cotton)
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
108484468
NCBI-ProteinID:
XP_017643749
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Position
8:55853883..55857459
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AA seq
454 aa
AA seq
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MKNLGLILYCSSCSTWNIIVFICSFMLMHSNVVVHAESFEFDSLLQLPKSGSSARIRPRA
KQVLSVSDFGAKGDGYHNDTRAFENAWNVACSSPGRIRIVIPAGYTYLVHPVELGGHCKS
KITLMISGTIVAPKNPNVWDGLNPCKWLYFHEVKHLHVVGGGTINGMGQQWWARSCKRKK
TNPCRHAPTALTFHKCKDLKVHDLMLVNSQQMHIAFTSCLRVMVSNLKVIAPSTSPNTDG
IHISSSHGVEVKNSVVRTGDDCVSIVGNTSRVQIRNFVCGPGHGISIGSLGKSNSWAQVR
NVLVDGAFISNTENGVRIKTWQGGSGYASDMKFMNILMENVAYPIIIDQYYCDSDLPCAN
QTLAVKVDNISYVHIKGTSAVEEAIRFACSDSLTCEGLYLEDIQLVSKTRGITKSFCWEA
YGSSSGLVQPAPCLTCSDGFIKQKVPYGLPIGSF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctgggtttaatcttgtattgttcttcatgttcaacatggaacatcatcgtt
ttcatttgcagttttatgttaatgcattcaaatgttgtagtacatgcagaaagctttgaa
tttgactcacttttacagctcccaaaatctgggtcatcagcaagaatccgacccagagct
aaacaggttctctctgtcagtgattttggtgctaaaggagatggttaccataatgacacc
agggcttttgaaaatgcctggaatgtagcatgttcttcccctggcaggataaggattgta
ataccggctggatatacttacctggttcatcctgttgagcttggtgggcattgcaagtca
aagatcactttgatgatttcaggtaccattgttgctccaaaaaaccccaatgtctgggat
ggtttgaatccttgcaagtggctttactttcatgaggttaaacacctacatgtagttggg
ggaggaactatcaatggaatgggacaacaatggtgggctaggtcttgcaaaagaaagaaa
acaaatccatgtcggcatgctccaaccgctttgactttccacaagtgtaaggatctgaaa
gtccatgatcttatgctggtcaacagtcaacagatgcatatagcattcactagttgtcta
agggttatggtatctaatcttaaagtgatagcaccctctactagccccaacacagatgga
attcatatcagttcatcccatggtgttgaagtcaagaatagcgttgtaagaacaggagac
gattgcgtttcaatagttggcaatacttctcgtgtccaaatcagaaactttgtttgtgga
cctggtcatggtataagtattggaagcttgggaaaatcaaactcttgggcacaggttcgt
aatgtacttgttgatggagctttcatttccaacaccgagaatggagtgcggatcaaaaca
tggcagggaggtagtggttatgcttccgatatgaagttcatgaatatattgatggagaat
gtagcgtatccaatcattattgatcaatattattgtgattcagacctgccatgtgctaac
cagacattggctgttaaagtggacaatatctcctatgtgcacattaagggaacatcagct
gtggaggaagcaataagatttgcttgcagtgatagccttacatgtgaagggttatatttg
gaagatattcaactcgtttcgaaaactagaggcatcactaaatctttttgttgggaagct
tatggctcaagttcgggtctagtgcagcccgctccatgcctaacatgcagtgatggcttc
attaagcagaaagttccttatggcctgcctattggttccttttga
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