KEGG   Geoglobus ahangari: GAH_01512Help
Entry
GAH_01512         CDS       T03939                                 

Definition
(GenBank) DNA ligase D, ligase domain
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
gah  Geoglobus ahangari
Pathway
gah03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:gah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    GAH_01512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gah03400]
    GAH_01512
Enzymes [BR:gah01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GAH_01512
DNA repair and recombination proteins [BR:gah03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     GAH_01512
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID: AKG91197
UniProt: A0A0F7IE38
LinkDB All DBs
Position
complement(1297789..1298772)
Genome map
AA seq 327 aa AA seqDB search
MSWFDEKIRPMLAKRAEPFDSPDFIYELKLDGTRCIAFVDVERRRVRMQNRRLFEIAYRY
PEIDLLSAFDDSVVVDGEIVVLKNGVPDFSLLQKREHVDSESRVRILSKLYPAVYFVFDV
LYSSGRWTMKRPLSERKEILGEVLSETEHVLKVESFREKGVELFSKAVSMGFEGLVAKRI
DSPYRPGVRSDEWLKIKKRRTMDCVITGYLEGEGQREGLFGSLVLAVYDGETLIHVGQVG
TGFSSDFLREFTGKLREIEIQTPHFSESFARPVHWVKPVYVCEVEYLELTKDCKLRAPVF
RRLRYDKSPEDCTAEQIEECIKNRVVD
NT seq 984 nt NT seq  +upstreamnt  +downstreamnt
atgagctggttcgacgagaagataaggccaatgctcgcgaagagggccgagccgtttgac
tctccagacttcatatacgagctcaagctcgatggcacgaggtgcatcgccttcgtggac
gtggagaggcgaagggtcaggatgcagaaccgaaggctgttcgagatagcctacaggtac
cccgaaatcgaccttctgagtgcgtttgacgacagcgtagttgttgacggggagatagtc
gtcctgaaaaacggagttccggacttctccctcctgcagaagagggagcatgtggactct
gaaagcagggtaaggattctctcgaagctgtatccagcagtttacttcgtcttcgacgtc
ctttactcctcgggaaggtggacgatgaagcgtccgctctctgagagaaaggagattctc
ggagaagtgctctccgagaccgaacacgttctcaaggttgagtcgttcagggagaagggg
gtggagctgttcagcaaagcggtttcaatgggcttcgaggggcttgtagcaaagaggatc
gactcaccctacaggccgggagtcaggagtgacgagtggctcaagatcaagaagaggaga
accatggactgcgtcataaccggctacctcgagggggaagggcagagggaggggctcttc
ggatccctcgtgcttgccgtttatgatggggaaacgctcatccacgtgggtcaagttggc
acaggattctcatcagactttctgagggagttcacgggaaagctgagagaaattgagatc
cagacaccccacttcagcgagagctttgccagacccgttcactgggtcaagcctgtatac
gtgtgcgaggtggagtacctcgagctcacgaaggactgcaagctgagagctccggtattc
aggcggctcagatacgacaagagcccggaggactgcacagccgaacagatcgaagagtgt
ataaaaaatagggttgttgattga

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