KEGG   Granulosicoccus antarcticus: IMCC3135_00360
Entry
IMCC3135_00360    CDS       T04938                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
gai  Granulosicoccus antarcticus
Pathway
gai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IMCC3135_00360 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gai03019]
    IMCC3135_00360 (deaD)
   03009 Ribosome biogenesis [BR:gai03009]
    IMCC3135_00360 (deaD)
Enzymes [BR:gai01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     IMCC3135_00360 (deaD)
Messenger RNA biogenesis [BR:gai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     IMCC3135_00360 (deaD)
Ribosome biogenesis [BR:gai03009]
 Prokaryotic type
  rRNA helicases
   IMCC3135_00360 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_19 HEM4 Flavi_DEAD
Other DBs
NCBI-ProteinID: ASJ70198
UniProt: A0A2Z2NJZ2
LinkDB
Position
complement(89481..91553)
AA seq 690 aa
MPDTNAVQHFSDLALPDAVLRAVQAVGYETPTPIQSRTIPPLVEGRDLLGHAPTGTGKTA
AFALPILARMDMNAQGVQALVLAPTRELAIQVAEAFAKYATHMKNLRVLPIYGGQDYTGQ
IRQLNRGVNVVVGTPGRIMDHMRRGTLKLDNLKTLVLDEADEMLRMGFIDDVEWILEQTP
PTRQMALFSATMPSVIRRIAAKHLTDPVEINVESTAATAASIRQRYWVVSGLHKLDALTR
ILEAETFDGMIVFVRTRTATTEIADKLSARGFAASAMNGDMPQKQREQMVNKLKKGQLDI
LVATDVVARGLDVDRISHVVNYDIPSDTESYVHRIGRTGRAGRTGDAILFVTQRERRLLG
TIERATRQKIEPLQLPTIEMVNNKRIADFKQSISDNLATGELSYLQRLIEDFSRDHDIPA
ERVAAALARMYLGDQPLILTDKNDHSERKAKQRKERDDRRPAAASERPERVRQDSRPVPS
RDSNPYSKPEAAAAAPQAAAKHTDSPVAKPASEPAEKAVVHQEVTDDSRASRRRAADEAA
MEMENFRVEVGETHGVKPENLMGAIANEAGLDAAFIGRIKIHDSYSTVELPSGMPKFLLK
DLKRIWVCERQLNMSKVSDSSAGSSAPSASRKPKSLDGGHKAPKKAASESGSKEKSGSGG
SNSAPKTDAKGEVRKKERHRDRKSKGKSGK
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgcccgataccaatgctgtacagcacttttcagaccttgcactgcctgacgccgtcttg
cgcgcagtccaagccgtaggttacgaaacacctacccccatacagtctcgtactattcca
cctctggtggaaggtcgggacctgctcgggcacgcgcccacaggaaccggcaagacggcc
gcgtttgccttgccaattctggctcgaatggatatgaatgcccaaggcgttcaagcactg
gttctcgcccccacacgcgaacttgccattcaggtagctgaggcatttgccaagtatgcc
acccacatgaaaaatctgcgggtgctgcctatctatggaggccaggactacaccggccag
atccgtcaactcaaccgcggcgtgaatgtcgttgtaggtacccccggacgcatcatggac
cacatgcgccgtggcactcttaaactggacaatctcaagaccctggttctggatgaagca
gacgaaatgcttcgtatgggattcatcgacgatgtcgaatggattctggagcaaacgcca
cccacccgtcagatggcgctgttctcagccaccatgccttccgtcattcgccgtattgcg
gccaaacacttgaccgatccggttgagatcaacgtagaaagcacagcagccacagccgcc
tcgattcgtcagcgctactgggttgtcagcggcctgcacaagcttgatgcactcactcga
attctggaagccgaaaccttcgacggcatgatcgtgttcgtcagaacccgaacggccacc
acagaaattgccgacaaactcagcgctcgtggctttgcagcctctgccatgaatggcgac
atgccgcaaaaacaacgcgagcagatggtcaacaagctcaagaaaggccaactggacatt
ctggtggccactgatgtggttgcccgtggactggacgtcgatcgcatcagtcatgttgtc
aactatgacatcccttccgacactgaatcctacgtccatcgcattggccgaacaggtcgt
gccggacgtactggtgatgcaatcctgtttgtcacccagcgcgaacgtcgcctgctgggc
accatcgaacgggctacacgtcagaaaatcgaacctctgcaattgccgaccatcgagatg
gtcaacaacaagcgcatcgcagatttcaagcaaagcatcagcgacaatcttgccactggc
gagctgagctacctgcaacgcctgatcgaagatttctcacgtgatcacgacattcctgcc
gagcgcgtcgcagcggcactggcacggatgtacctgggcgaccagccactgatactcact
gacaagaacgaccatagtgagcgcaaggcgaagcaacgcaaggaacgagacgatcgtcgt
ccagcagcagccagcgaacggccggaacgcgtcagacaggactctcgtccggtaccttca
cgcgattcaaatccgtacagcaagccagaagcagctgcggctgcacctcaggcagctgca
aagcataccgacagccctgttgcgaagcctgcttccgaacctgctgaaaaagctgttgtt
catcaggaagttactgatgattcgcgtgcctcccgtcgccgtgcagctgatgaagctgcc
atggaaatggagaacttccgcgttgaagtcggcgaaacccacggggtcaagcccgagaat
ctgatgggtgctattgccaacgaagccggactagatgccgctttcattggtcgcatcaag
attcacgacagctacagcacggttgaactgccatcgggtatgcccaagttcctgctgaag
gatctcaagcgcatctgggtctgcgagcgtcagctcaatatgtccaaggtctctgactca
tccgcaggcagcagtgcacccagtgccagtcgcaagcccaagtctttagacggtggtcac
aaagctcccaagaaagcagcttcggagtctggcagcaaagaaaaatctggtagtggcggc
agcaactcagcacccaagacagatgcgaaaggcgaagtacgcaagaaagagcgtcatcgt
gaccggaagagcaaaggtaagtctggcaaatag

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