Granulosicoccus antarcticus: IMCC3135_27355
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Entry
IMCC3135_27355 CDS
T04938
Symbol
rapA_3
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
gai
Granulosicoccus antarcticus
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gai03021
]
IMCC3135_27355 (rapA_3)
Transcription machinery [BR:
gai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IMCC3135_27355 (rapA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Helicase_C_2
MCPVI
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
ASJ75525
UniProt:
A0A2Z2NYK7
LinkDB
All DBs
Position
6259785..6262574
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AA seq
929 aa
AA seq
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MSNDFSAGQRWISDTESDLGLGTILEVEHRQITVVFLATGETRIYAKESAPLTRVAFQAG
DIISSHEGWQLRVEKTDDIDGLRIYSGTREDTGEKTILNEASLDNFLQFRSPKDRLFAGL
IDGQRWFALRRSVFECRHQYAQSPVRGLTGARVSVLPHQIYIAVEALKRHHPRLLLADEV
GLGKTIEAGMIVHGSLANNQVSRVLIVVPSALLHQWLVEMLRKFNLNFRIMDAERFDELR
DTAPDGNPFLAEQLVLCSLDTLLENEEIGDAVAGAGWDMLVADEAHHLSWEPEEPSDAYT
LIEELAMETPAVLLLTATPEQLGQAGHFARLRLLDPERFGSLEQYLAEESSFGWVASVAD
KLAADEPLDEEQIVSLQTLLGEEFTDNELKTLSSTTTMALSDLGQRLIGKLVDRHGTGRL
MFRNTRRAITGFPERELHTYTLDDDSLDSKAVWILEFLLEQYPEKVLVICSSRDTVQELA
EHLRVAGVQSAQFHEDMSIVERDRAAAWFSDPEEDCRLMLCSEIGSEGRNFQFLHHLVML
ELPQSPDLLEQRIGRLDRIGQTETIKIHVPAAPGTQDSLLLSWYHEGLNAFERICRSGSA
VRARIADQLEPLLAKAEAGDNIPEKAIATLIQESRQLTEQLDAELESGRDRLLELNSNRP
ELIQEHLDELARLDRNYALQDFMEAVFDRFGVDMAEQRDHWIIHPSDHMQVDHFPLLPAS
GMTLTFDRATALTREDFTYLTWDHPMVTAAMDLILDEGFGQADCQVIKTDALPANLSFVE
ASYVLQCTADARLNMERYLPAQVQTWSVGIDGKDYSEQVAALELDSLKQRYDRNALRKVV
LKNRDSLEKLIDRSAALAEEALPELVAIARAKIDEELSEARERLLSLSRVNPSVKEEEVR
AVDERHQALIDALDGTHARPVSARVMFNT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgatttttccgcaggccaacgctggataagcgataccgagtccgaccttgga
ctaggcaccatacttgaggtcgagcaccgacagattactgtggtctttctggccactggt
gaaacccgaatctatgccaaggagtctgcgccgctgacacgcgtagcctttcaggctggc
gacatcatcagcagtcatgaaggctggcagttacgtgtagaaaagactgacgatatcgac
ggtttgagaatctatagcggcacgcgcgaggatactggcgagaaaaccattctcaatgaa
gcatcgctggataactttctgcagttccgctctcccaaggaccggctgttcgctggtctg
attgacggacagcgctggttcgccctgcgccgcagcgtcttcgaatgtcgccatcaatat
gctcaatcaccggttcgtggactcacgggcgcccgcgtcagtgttcttccacatcagatc
tacattgcagtggaggccttgaaacgtcatcacccgcgcttgctactggccgatgaggtt
ggactcggcaagaccattgaagccggcatgatcgtccatggttcactggccaacaaccag
gttagccgggtgcttatcgtggtgccttcggccttgttgcatcaatggcttgtggaaatg
ctgcgcaagttcaatctgaacttccgcatcatggatgccgaaagatttgatgaactacga
gacacggcccctgatggcaatccctttctggccgaacaactggttctgtgttctctggac
accttgctggaaaacgaagaaatcggcgatgccgtagccggtgctggctgggacatgctg
gtggctgatgaagcccatcacctgagctgggaaccggaagaaccttctgatgcctatacg
ctcatcgaagagctggccatggagacaccggccgtcttgctgctgacggcaacgccagaa
caactcggccaggcaggccacttcgcccgtctacgcctgctggatccagaacgttttggc
tctctggagcagtacctggccgaagaatcatccttcggctgggtcgcatcggttgccgac
aaactggccgccgacgagccactggatgaggagcagattgtcagcctgcagaccctgctc
ggcgaagaatttaccgacaacgaactcaagaccctcagctcgaccacaaccatggcactc
agcgacctgggacagcgcctgattggcaaactggtggaccggcatggtactggtcgactc
atgttccgcaatacaaggcgtgccatcacaggttttccagaacgagaactgcatacctac
acgctggatgatgactctcttgacagcaaggctgtctggatactggagttcctgcttgag
caatatcctgaaaaagtactggtcatctgttcttctcgggataccgtccaggagcttgca
gagcatctgcgcgtagccggtgtgcaaagtgcgcagttccatgaagacatgtccatcgtt
gagagagaccgtgcagccgcctggttttcagatcctgaagaagattgccgactgatgctt
tgctcggaaatcggcagcgaaggtcgcaacttccagtttctgcaccacctggtcatgctg
gaattaccacaaagccccgacctgctcgaacagcgcattggtcgactcgatcgtatcggt
cagacagaaaccatcaagattcatgtccctgcagcaccaggaacgcaagactcgctgctg
ctgagctggtaccacgaaggtctgaatgcattcgaacgaatctgtcgatccggctctgcg
gtacgagcacgcatcgccgatcagctcgaaccactactggccaaggccgaagcaggcgac
aacattcctgaaaaggccatcgcgacccttatccaggagtctcgccagctaaccgagcaa
ttggacgccgagctcgaatccggtcgtgaccgcctgctggaactcaattccaatcgcccc
gaactgatccaggaacatctggacgaactggcacgccttgatcgcaactatgcactgcag
gatttcatggaagcggtattcgatcgattcggggtcgacatggctgagcagcgtgaccac
tggattatccatcccagtgatcacatgcaagttgatcactttcccttgctgcctgccagc
ggcatgacactcaccttcgatcgcgccaccgcgctgaccagagaagacttcacctatctg
acctgggaccatccgatggtcacggctgccatggacctgattctggatgaaggcttcgga
caggctgactgtcaggtcatcaagaccgatgcactaccggcaaatctgagcttcgtcgaa
gccagctatgttcttcaatgcaccgctgatgcccgcctgaacatggagcgctacctgccc
gcacaggtccagacctggagcgtcggcattgatggcaaggactactccgagcaggtggca
gctctggagcttgacagcctgaaacagcgttacgatcgtaatgcactgcgcaaggttgtg
ctcaagaaccgcgattcgctggaaaaactcatcgatcgatcggcggctctggccgaagag
gcactaccggaactggttgccattgcccgtgcaaagatcgacgaggaactgtctgaggca
cgtgagcgcctgctatcgctgtctcgtgtaaatccgtcggtcaaggaagaggaagtcagg
gcggtcgacgagcgtcaccaggcattgatcgatgcgcttgatggcacccatgccagaccg
gtgtccgctcgagtcatgttcaatacctga
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