Glutamicibacter halophytocola: AOZ07_10490
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Entry
AOZ07_10490 CDS
T04229
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
gar
Glutamicibacter halophytocola
Pathway
gar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gar00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AOZ07_10490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gar03021
]
AOZ07_10490
Transcription machinery [BR:
gar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOZ07_10490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ALG29362
LinkDB
All DBs
Position
complement(2282243..2283475)
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AA seq
410 aa
AA seq
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MRNASLERLFVSSSETNANRQATEAEVNEAEASAETPAAKKRATKAKPRTKKVAADSAAQ
DESTAAVAEGDEEAEAGADSKPEDDSKGFTLSTGDDDAPQQQVMVAGATADPVKDYLKQI
GKVALLNAEQEVDLALRIEAGLFAADKLEKDDGSMDQRLRWDYEQIIHDGKIAKNHLLEA
NLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRA
MADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVVEVQKYGR
EPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVAMR
FGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atccggaacgcatcgttagaaaggttattcgtgtcatcttctgagacgaacgctaatcgt
caagcaactgaagccgaggtcaacgaggctgaagcatcggcagaaactcctgcggcgaag
aagcgtgctaccaaggccaagcctcggaccaaaaaggtagctgcagacagtgcagcgcag
gacgaatcaaccgcagcggtggcagaaggcgacgaggaagccgaggctggagcggattcc
aagcctgaagacgattccaagggcttcacgctttccaccggagatgacgatgccccgcag
cagcaggtcatggttgccggcgcaaccgcggaccccgtcaaggactacctgaagcagatc
ggtaaagtcgccctgctgaacgcagagcaggaagtcgacttggcgctgcgcatcgaagct
ggcctgtttgcagcagacaagctggaaaaagacgacggctcaatggatcagcgtttgcgc
tgggactacgagcagatcattcacgacggcaagatcgccaagaaccacttgctcgaagcc
aacctccgcttggttgtatcgctggcaaagcgctacaccggtcgcggcatgctcttcttg
gacctgatccaggaaggcaacctgggcctgatccgcgcggttgaaaaattcgattacacc
aagggcttcaagttctcgacgtacgcaacttggtggatccgacaggcaattacccgtgca
atggctgaccaggctcgcaccatccgtattccggttcacatggtggaagtcatcaacaag
ctggctcgcgtacagcgccagatgttgcaggatcttggtcgtgaaccaacccctgaagag
ctggccaaggaactggacatgacccctgaaaaggttgttgaagttcagaagtacggtcgc
gagcctatttccctgcacacgccactgggtgaagatggcgactccgaattcggtgacctc
attgaagactccgaagctgtcgttcccgctgacgcagtctcgttcacgctgttgcaggag
cagcttcactccgttctggacacgctctcagagcgtgaagcgggcgttgttgcaatgcgc
ttcggcttgaccgatggccagcctaagactttagacgaaattggcaaggtctatggtgtt
acgcgtgagcgtatccgccagatcgaatccaagaccatgtccaagcttcgccatccgtcg
cgctcccaggtgctgcgcgactacctcgactaa
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