Glutamicibacter halophytocola: AOZ07_11955
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Entry
AOZ07_11955 CDS
T04229
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gar
Glutamicibacter halophytocola
Pathway
gar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOZ07_11955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gar03021
]
AOZ07_11955
03400 DNA repair and recombination proteins [BR:
gar03400
]
AOZ07_11955
Enzymes [BR:
gar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOZ07_11955
Transcription machinery [BR:
gar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOZ07_11955
DNA repair and recombination proteins [BR:
gar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOZ07_11955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ALG29623
UniProt:
A0A5B8IM54
LinkDB
All DBs
Position
complement(2606657..2607658)
Genome browser
AA seq
333 aa
AA seq
DB search
MLITQRPTLTEEVVAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSVRIDGVL
HEFTTVAGVKEDVTELVLNIKNLSVSSEHDEPVVAYLRKQGPGIVTAADITPPAGVEFHN
PDLHIATLNANGKFDMELTIERGRGYVSAAQNKNIDGEIGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDRLIVDVETKESIAPRDAVASAGTTLVELFGLFRELNTAAEGIEIGPSPTD
AAMAADMALPIEDLELTVRSYNCLKREGIHSVGELVTRSEADLMDIRNFGAKSIDEVKAK
LVELGLALKDSPPGFDLAARSALEDGDEYDEGL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattacgcagcgcccaaccctgaccgaagaagtagttgccgaaaaccgctcccgg
ttcgtcattgaaccgctggagccaggctttggttacaccctgggtaactcgcttcgccgt
accctgctctcctcgatccctggtgcctctgtcaccagtgttcgaattgacggagtactg
cacgagttcaccaccgtagccggtgtcaaggaagatgtcaccgaactggtcttgaacatc
aagaacctgtcggtttcttccgagcacgacgagccagtcgttgcctacctgcgcaagcag
ggcccgggcatcgttactgcagcggacatcaccccgccagccggtgtggagttccacaac
cctgatctgcacattgcaaccttgaacgccaacggcaagttcgatatggaactgaccatt
gagcgtggccgtggctatgtgtctgccgctcagaacaagaacatcgatggcgagatcggc
cgcatccctgtggattcgatctactccccagttctgaaggtgactttccgcgtggaagcc
acccgtgttgagcagcgcaccgacttcgatcgcctgatcgttgacgtggagaccaaggaa
tcgatcgccccgcgcgatgccgtggcatccgcaggtaccaccctggttgagctgttcggc
ttgttccgcgaactgaacaccgcagctgaaggtatcgaaatcggtccatcgccaacggac
gcagccatggctgcagacatggcactgccgatcgaggatctggaactgaccgttcgttcg
tacaactgcttgaagcgtgagggcatccactccgtgggtgaactcgttacccgctccgag
gctgacttgatggacatccgcaacttcggtgcaaagtccattgacgaagtcaaggccaag
ctggttgaactgggtctggccctgaaggattcccctccaggctttgatctggccgctcgt
agcgccctcgaagatggcgacgaatacgacgaaggtctgtaa
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