Citrifermentans bemidjiense: Gbem_1017
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Entry
Gbem_1017 CDS
T00749
Name
(GenBank) sodium solute symporter and sensor histidine kinase response regulator, SSF and PAS domain-containing
Organism
gbm
Citrifermentans bemidjiense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
PAS_4
PAS
PAS_9
HATPase_c_2
PAS_8
VpsR
MLTR_LBD
Motif
Other DBs
NCBI-ProteinID:
ACH38038
UniProt:
B5EGH3
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Position
1181255..1185226
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AA seq
1323 aa
AA seq
DB search
MLTPFSLIVVCSLYMVALVVVALWGERRAAAGKDLCNNPLVYALSLTVFHTAWTFYGSVG
KAASMGMIFLTVYVGATLSVMLWWLILRKMVRIKNIYRITSIADFISLRYSKSTALAALV
TIICIFGAVPYFSLQLKAILATFDLITGSSGAFWKHLNIGLFICAFVILFTILVGVRKLV
PTERHQGMVVAMTAASIVKLVPFLAVGAYVTYSMYGGFDDVFSRFAQIPASTTLTSTQCT
PSFYASWTTYMLLSTSSVMFLPRQFHMAVVENVDEKHILTAMWLFPLYMLLINLFVMPVT
LAGLLAGYPAQQADNFILMLPLANGQGVLSLLVFLGGFSAATGLIIIGSMTIATMATNHL
LLPVIESVTFLRGLKQYLLQCRWLTVALLVFAGYWFQGVVGEFFILVDIGVPSFAAVLQL
APAIIGGLYWRKGNLAGAFLGMAAGFLLWMYTLILPALVQGGLLNHAILGDGLWGIGWLR
PEHLFYVTGLDAASHSVFWSMFVNVTLYIFGSLFFAQDLQERNTAEKFVGALDIGPTPGP
SGMEAGIDLAAKMKEIEELYSQYFPPEKSSAMAGACLSTLRMERKSRISVAELAELYNEA
QIILASAIGAAAAHRAFIKSRVISEQEQSTLKQVYADMIAELKMAPSDLKRRIDYHRERE
QLLSLQAQELEEKVRERDQEIMQRRIAEQALRDSERRLADIIDFLPDPTFVVNAQGAVVI
WNRAAEEFTGAKAEAMLGKAGNECAIPFYGMRRPLLLDMVLAPWRAEEIKPLYVRLVVEG
GKIIGEGPVKSASRPHAYTMAMAAPLYDSEGEVIAVIESVRDITELKEGEDELKRHRAHL
EELVRERTMELLVAKERAEVANQAKSAFLSSMSHELRTPLNAILGYAQILKRQDNLTDAQ
RQQLEIVRGCGEHLLSLINDVLDMGKIEAQKMELAELSFDLSALLGQVFSIAKVKADEKD
LGFKYEELNRLPRAVRGDQRKLKQILLNLLSNAVKYTHRGCVTVRVRYHSSTGVFACEIT
DTGTGIPRDKLGIIFEPFVQLADGGQIREGTGLGLSITRRLVSLMHGQVTVESEPGAGST
FRVELPLPTVTEGEISRAAAGQAISGYQGERRSILIVDDNVTNVSMLVALLEPLGFQINT
AENGREALSKAMEQKPDLVLLDLVMPEMDGLDAVREMRRHRELDLTRIIGTSATVTDSVR
RNMFLRQCDDFIGKPVPLELLLDRIAFHLNVRWEVAAAKIAATEHGEKQEREEAVEAPPF
AELKQLHKLALMGDMQGVRSWADRLEEQEPKYSRFADMLRGLAGEFRVKAILALVEQQMR
ESS
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgcttactccctttagcctcatcgtcgtgtgcagcctctatatggtcgccttggtcgtt
gtcgccctctggggcgaacgtagggccgccgccggcaaagacctctgcaacaaccccctc
gtctacgcgctgtcactgaccgtgttccacaccgcctggactttctatggcagcgtcgga
aaagctgcttccatgggcatgatctttctcaccgtatatgtcggggccacgctttctgtc
atgttgtggtggctgatcctgcggaagatggtgaggataaagaatatctaccggatcacc
agcatcgcagatttcatctctcttcgttacagcaagtcaactgctctagctgccttggtg
actatcatctgcatcttcggagcagtcccgtatttctcccttcagctcaaagctatactg
gcgaccttcgaccttatcaccggttcctccggcgccttctggaagcaccttaacatcggg
ctctttatctgcgctttcgtcatcttgttcaccatactggtcggcgtgagaaagcttgtg
cctaccgaacgccaccagggaatggtggttgcgatgactgctgcaagtatagtgaagctg
gttccgttcctcgcagtcggagcctacgtaacctacagcatgtacggaggcttcgacgat
gtattcagtcgttttgctcaaataccggccagcaccacccttacctcaacacagtgtact
ccctccttttacgcctcctggactacttacatgctgctttccacgtcgagcgtgatgttc
ctgccgcgacaatttcacatggcggtagttgagaacgtcgacgagaagcacatcctgacc
gccatgtggctcttcccactgtatatgctgctaatcaacctcttcgtcatgccggtaacg
ttggccggccttctggctgggtacccggcgcagcaggcagacaatttcatactcatgctg
ccgcttgccaatgggcaaggggtgttgtcgctgcttgtgttcctgggcggattctcggca
gcgaccggattgatcatcatcggatctatgactattgctaccatggccaccaatcatctg
ctgttaccggtcatcgagtcggtgacattcttgcgcggtctcaagcagtatctgcttcag
tgccgttggctcaccgtcgccctgctggtcttcgccggatattggttccagggagtggtg
ggggaattcttcatcttggtcgacatcggcgtcccttcctttgccgctgtgctgcaattg
gctcctgcaataatcggcgggctgtactggagaaaagggaacctggccggagcatttctc
ggtatggcagcaggtttcctgctctggatgtacacattgatattgccggccttggtgcaa
ggcgggttgctaaaccacgccatattgggtgacggcctatggggaataggatggctccgt
ccggagcatcttttctatgtaaccgggttggacgcggcaagccattccgtattttggagc
atgttcgtaaacgttaccctgtacatcttcggatcgttgttctttgcacaggaccttcag
gagcgcaacacagccgagaagtttgttggtgcgctagacataggccccacgcccggacct
tcaggcatggaggccggaatcgatctggcagccaagatgaaggagatagaagagctttac
agtcaatactttcctccggagaaatcatccgcgatggccggagcgtgtctttcgaccttg
aggatggaacgaaagagcaggatctccgtggccgagctggccgaattgtacaacgaggcg
cagatcatactggcgagtgcaataggcgctgcggcagcacacagggctttcataaagagc
cgtgtcatttccgagcaagagcaaagcaccttgaagcaggtctatgccgacatgattgcc
gagctgaaaatggccccctccgatcttaagagaaggatcgactaccaccgggaacgggag
caactgctgagcctgcaagcacaagagctggaagagaaggtaagggagcgggaccaggaa
ataatgcagcggcggattgccgaacaggcactcagagattcggagcggcgcttggctgac
ataatcgatttccttcccgatccgacctttgtcgtcaatgcacaaggagcggtcgtcatt
tggaaccgcgccgcagaggagttcaccggtgccaaggccgaagctatgctgggtaaagcc
ggtaacgagtgcgccatccccttctatggaatgagacgaccgctgctactcgacatggtg
ctggccccgtggcgggctgaagagatcaagccgctgtatgtgcggctcgtcgtcgaaggg
ggcaaaataatcggcgagggcccggtaaaaagcgcctctcgcccccacgcttataccatg
gcaatggcagcacctttgtatgactctgagggggaggtgattgcggtgatcgaatcggta
cgggatatcaccgaactgaaggagggagaagacgagctgaagaggcaccgcgcccaccta
gaggagttggttcgtgagcggacaatggagctgttggtagccaaggagcgggccgaggtg
gcaaaccaggcgaaaagcgccttcctctccagcatgagccacgagctgcgcactccccta
aacgccatactggggtacgcccagatcctgaagcggcaggacaacctgacggatgcacaa
cggcaacagctcgaaatcgtgcgcggctgcggcgagcatctgctttcgctcataaacgac
gtcctggatatgggtaagatcgaggcccagaaaatggaacttgcagaactctcctttgat
ctctccgccctactgggacaggtgttcagcatcgccaaggtgaaggcggatgagaaggat
ctgggattcaagtacgaggaactgaatcgtttgccgcgggccgtgcggggggaccagcgt
aaactcaagcagatcttgctgaacctgctttccaacgcggtgaaatacacgcaccgcggc
tgtgtaactgttcgtgtgcgttaccactcgagcaccggcgtattcgcatgcgagataacg
gataccggcaccgggatccccagggacaagctcggtatcattttcgagccgttcgtacag
ttggcggatgggggacagatccgggagggaaccggcttggggctctcgatcacccggcgc
ctggtgagcctgatgcatggacaggtcacggtggagagcgaacccggtgcaggaagcacc
ttcagggtggaactgccgctgccgacggtgacggaaggcgagatctcccgagcggcggcc
gggcaggcaatctccggctaccagggggagcgcaggagtatcctcatcgtcgatgacaat
gtcaccaatgtctcgatgctggtagccctgctggaacccttgggctttcagatcaatacc
gcggagaacgggcgggaagcactgagtaaggcaatggagcaaaagcccgatctcgtgctg
ctggacttggtcatgccggagatggacgggctggatgctgtccgggaaatgaggcggcac
cgggaactggacttgaccaggatcatcgggacctcggcgacggtgaccgatagcgtccgc
aggaacatgtttttgcggcagtgcgacgactttatcggcaaaccggttccacttgaactg
ctcctggacaggatcgctttccatttgaatgtgagatgggaggtggctgcggccaaaata
gcggcgacagagcacggcgagaaacaggaacgggaggaagcggtcgaggctcctcctttt
gcagagctgaagcagcttcacaaactggcgttgatgggggacatgcagggagtccgatcc
tgggccgaccgtcttgaggagcaggagccaaaatacagccgttttgccgacatgttgcgt
ggccttgccggcgagttcagggtaaaggccatacttgcgctggtggagcagcagatgaga
gagtcgtcgtga
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